RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 FOXO4P98177 505 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 USP17L1Q7RTZ2 530 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 API5Q9BZZ5 524 aaKnown RBP21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 WBP1LQ9NX94 342 aa21.71■■□□□ 1.07
SMARCD3-210ENST00000477169 IPO8O15397 1037 aaKnown RBP21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 ALDH1L1O75891 902 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 KIF4BQ2VIQ3 1234 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 SAPCD2Q86UD0 394 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 AIDAQ96BJ3 306 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 DCPSQ96C86 337 aaKnown RBP21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 CAPNS2Q96L46 248 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 PSME4Q14997 1843 aa21.7■■□□□ 1.06
SMARCD3-210ENST00000477169 GRM8O00222 908 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 FOXN1O15353 648 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 ZNF280AP59817 542 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 MAP2K1Q02750 393 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 IFIT5Q13325 482 aaKnown RBP21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 HHIPL1Q96JK4 782 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 GMLQ99445 158 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 COA1Q9GZY4 146 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 ZNF804BA4D1E1 1349 aa21.69■■□□□ 1.06
SMARCD3-210ENST00000477169 TRIM27P14373 513 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 CYP4F22Q6NT55 531 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 ATF7IPQ6VMQ6 1270 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 PAXIP1Q6ZW49 1069 aaPredicted RBP21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 KRT26Q7Z3Y9 468 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 ZNF408Q9H9D4 720 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 C9orf78Q9NZ63 289 aaPredicted RBP21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
SMARCD3-210ENST00000477169 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 USP17L8P0C7I0 530 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 CHRNDQ07001 517 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 LMBR1LQ6UX01 489 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 TXNRD3Q86VQ6 643 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 TNS4Q8IZW8 715 aa21.67■■□□□ 1.06
SMARCD3-210ENST00000477169 CTCFP49711 727 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-210ENST00000477169 CHMP3Q9Y3E7 222 aa21.66■■□□□ 1.06
SMARCD3-210ENST00000477169 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
SMARCD3-210ENST00000477169 DACT2Q5SW24 774 aa21.65■■□□□ 1.06
SMARCD3-210ENST00000477169 STRIP1Q5VSL9 837 aa21.65■■□□□ 1.06
SMARCD3-210ENST00000477169 MYOZ2Q9NPC6 264 aa21.65■■□□□ 1.06
SMARCD3-210ENST00000477169 PRDM10Q9NQV6 1147 aa21.65■■□□□ 1.06
SMARCD3-210ENST00000477169 MYO3BQ8WXR4 1341 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 MAP2K2P36507 400 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 KCNJ4P48050 445 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 GRM1Q13255 1194 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 SCARF1Q14162 830 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 CCDC57Q2TAC2 916 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
SMARCD3-210ENST00000477169 MMP14P50281 582 aa21.63■■□□□ 1.05
SMARCD3-210ENST00000477169 SULF1Q8IWU6 871 aa21.63■■□□□ 1.05
SMARCD3-210ENST00000477169 CLUAP1Q96AJ1 413 aa21.63■■□□□ 1.05
SMARCD3-210ENST00000477169 GGA3Q9NZ52 723 aa21.63■■□□□ 1.05
SMARCD3-210ENST00000477169 ADM5C9JUS6 153 aa21.62■■□□□ 1.05
SMARCD3-210ENST00000477169 KLRK1P26718 216 aa21.62■■□□□ 1.05
SMARCD3-210ENST00000477169 INTS3Q68E01 1043 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-210ENST00000477169 TTLL5Q6EMB2 1281 aa21.62■■□□□ 1.05
SMARCD3-210ENST00000477169 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-210ENST00000477169 ASTN2O75129 1339 aaPredicted RBP21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 TAF5LO75529 589 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 TAF7LQ5H9L4 462 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 ANGEL2Q5VTE6 544 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 LDHAL6AQ6ZMR3 332 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 OGFOD1Q8N543 542 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 C2orf69Q8N8R5 385 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 FBXW7Q969H0 707 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 GBA2Q9HCG7 927 aaPredicted RBP21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 THSD7BQ9C0I4 1608 aa21.61■■□□□ 1.05
SMARCD3-210ENST00000477169 UTYO14607 1347 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 PLIN1O60240 522 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 AOC2O75106 756 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 NBPF7P0C2Y1 421 aaPredicted RBP21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 HUNKP57058 714 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 HELBQ8NG08 1087 aaPredicted RBP21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 ZNF594Q96JF6 807 aaPredicted RBP21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 BEGAINQ9BUH8 593 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 MXD3Q9BW11 206 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 CD209Q9NNX6 404 aa21.6■■□□□ 1.05
SMARCD3-210ENST00000477169 PITPNM2Q9BZ72 1349 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 IRS2Q9Y4H2 1338 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 RLBP1P12271 317 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 DZIP1LQ8IYY4 767 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 SUCLG2Q96I99 432 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 USP44Q9H0E7 712 aa21.59■■□□□ 1.05
SMARCD3-210ENST00000477169 ZNF646O15015 1829 aaPredicted RBP21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 SNAP23O00161 211 aa21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 LBX1P52954 281 aa21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 GTF2IP78347 998 aa21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 TMEM57Q8N5G2 664 aa21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 CNNM1Q9NRU3 951 aa21.58■■□□□ 1.05
SMARCD3-210ENST00000477169 HSPA8P11142 646 aaKnown RBP21.57■■□□□ 1.04
SMARCD3-210ENST00000477169 FTSJ3Q8IY81 847 aaKnown RBP21.57■■□□□ 1.04
SMARCD3-210ENST00000477169 CDCA5Q96FF9 252 aa21.57■■□□□ 1.04
SMARCD3-210ENST00000477169 NOGQ13253 232 aa21.56■■□□□ 1.04
SMARCD3-210ENST00000477169 NBPF9Q3BBW0 867 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms