RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TRAK2O60296 914 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 LMOD3Q0VAK6 560 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 PNMA8AQ86V59 439 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-214ENST00000477152 LDHDQ86WU2 507 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 CCDC24Q8N4L8 307 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 RPGRQ92834 1020 aaKnown RBP9.52□□□□□ -0.89
BRCA1-214ENST00000477152 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 KLRG2A4D1S0 409 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-214ENST00000477152 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 A6NJR5 290 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 PPP1R42Q7Z4L9 355 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 MRPL50Q8N5N7 158 aaKnown RBP9.52□□□□□ -0.89
BRCA1-214ENST00000477152 NBPF3Q9H094 633 aa9.52□□□□□ -0.89
BRCA1-214ENST00000477152 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
BRCA1-214ENST00000477152 EIF6P56537 245 aaKnown RBP9.51□□□□□ -0.89
BRCA1-214ENST00000477152 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
BRCA1-214ENST00000477152 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
BRCA1-214ENST00000477152 BABAM1Q9NWV8 329 aa9.51□□□□□ -0.89
BRCA1-214ENST00000477152 HACL1Q9UJ83 578 aa9.51□□□□□ -0.89
BRCA1-214ENST00000477152 NUP98P52948 1817 aa9.51□□□□□ -0.89
BRCA1-214ENST00000477152 IBTKQ9P2D0 1353 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-214ENST00000477152 MAP3K15Q6ZN16 1313 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 DDNO94850 711 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 LMOD1P29536 600 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 NFE2L2Q16236 605 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 RBM17Q96I25 401 aaKnown RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 GJA5P36382 358 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 PIP4K2AP48426 406 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 PRELPP51888 382 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 USP46P62068 366 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 HTRA3P83110 453 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 PSMD1Q99460 953 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
BRCA1-214ENST00000477152 RRP7AQ9Y3A4 280 aaKnown RBP9.5□□□□□ -0.89
BRCA1-214ENST00000477152 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 LAPTM4BQ86VI4 370 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 RNF123Q5XPI4 1314 aa9.49□□□□□ -0.89
BRCA1-214ENST00000477152 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 POTECB2RU33 542 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 TK2O00142 265 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 HRO43593 1189 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 RALBP1Q15311 655 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 GPC2Q8N158 579 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 NBPF15Q8N660 670 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 TSC1Q92574 1164 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 TAF1DQ9H5J8 278 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 EPHX2P34913 555 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
BRCA1-214ENST00000477152 ZNF277Q9NRM2 450 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-214ENST00000477152 CFAP99D6REC4 459 aa9.47□□□□□ -0.89
BRCA1-214ENST00000477152 USP17L8P0C7I0 530 aa9.47□□□□□ -0.89
BRCA1-214ENST00000477152 MYL6BP14649 208 aa9.47□□□□□ -0.89
BRCA1-214ENST00000477152 HLFQ16534 295 aa9.47□□□□□ -0.89
BRCA1-214ENST00000477152 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-214ENST00000477152 MIS18AQ9NYP9 233 aa9.47□□□□□ -0.89
BRCA1-214ENST00000477152 C6orf229H3BNL8 230 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 FZD9O00144 591 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 RAD21O60216 631 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 HOXA10P31260 410 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-214ENST00000477152 CRY2Q49AN0 593 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.89
BRCA1-214ENST00000477152 NIM1KQ8IY84 436 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.89
BRCA1-214ENST00000477152 PPEF1O14829 653 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-214ENST00000477152 BCAMP50895 628 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 RIPK4P57078 832 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 MTMR2Q13614 643 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 PLEKHF1Q96S99 279 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 UTP14AQ9BVJ6 771 aaKnown RBP9.46□□□□□ -0.9
BRCA1-214ENST00000477152 CEP350Q5VT06 3117 aa9.46□□□□□ -0.9
BRCA1-214ENST00000477152 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
BRCA1-214ENST00000477152 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms