RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 TAF5LO75529 589 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 CDC37L1Q7L3B6 337 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 USP48Q86UV5 1035 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 GMLQ99445 158 aa14.13□□□□□ -0.15
PTPRN-213ENST00000476930 ASTN2O75129 1339 aaPredicted RBP14.13□□□□□ -0.15
PTPRN-213ENST00000476930 CELF2O95319 508 aaKnown RBP14.12□□□□□ -0.15
PTPRN-213ENST00000476930 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
PTPRN-213ENST00000476930 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 ZNF408Q9H9D4 720 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 ZNF609O15014 1411 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 PTPRCP08575 1304 aa14.12□□□□□ -0.15
PTPRN-213ENST00000476930 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
PTPRN-213ENST00000476930 KCNA4P22459 653 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 KCNJ4P48050 445 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 ZNF280AP59817 542 aaPredicted RBP14.11□□□□□ -0.15
PTPRN-213ENST00000476930 CCDC57Q2TAC2 916 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 DACT2Q5SW24 774 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 COA1Q9GZY4 146 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 UTYO14607 1347 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 IRS2Q9Y4H2 1338 aa14.11□□□□□ -0.15
PTPRN-213ENST00000476930 ADM5C9JUS6 153 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 IFFO2Q5TF58 517 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 CYP4F22Q6NT55 531 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
PTPRN-213ENST00000476930 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 THSD7BQ9C0I4 1608 aa14.1□□□□□ -0.15
PTPRN-213ENST00000476930 ECM29Q5VYK3 1845 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 PLIN1O60240 522 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 GRM1Q13255 1194 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 SCARF1Q14162 830 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 TAF7LQ5H9L4 462 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 STRIP1Q5VSL9 837 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 SAPCD2Q86UD0 394 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 MIER1Q8N108 512 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
PTPRN-213ENST00000476930 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 PUS3Q9BZE2 481 aaKnown RBP14.09□□□□□ -0.15
PTPRN-213ENST00000476930 BICC1Q9H694 974 aaKnown RBP14.09□□□□□ -0.15
PTPRN-213ENST00000476930 MYOZ2Q9NPC6 264 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 CNNM1Q9NRU3 951 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 GGA3Q9NZ52 723 aa14.09□□□□□ -0.15
PTPRN-213ENST00000476930 FOXN1O15353 648 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 GTF2IP78347 998 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 CD209Q9NNX6 404 aa14.08□□□□□ -0.16
PTPRN-213ENST00000476930 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
PTPRN-213ENST00000476930 ANGEL2Q5VTE6 544 aaKnown RBP14.07□□□□□ -0.16
PTPRN-213ENST00000476930 C15orf52Q6ZUT6 534 aaKnown RBP14.07□□□□□ -0.16
PTPRN-213ENST00000476930 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
PTPRN-213ENST00000476930 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
PTPRN-213ENST00000476930 MYH13Q9UKX3 1938 aa14.06□□□□□ -0.16
PTPRN-213ENST00000476930 AOC2O75106 756 aa14.06□□□□□ -0.16
PTPRN-213ENST00000476930 NBPF9Q3BBW0 867 aa14.06□□□□□ -0.16
PTPRN-213ENST00000476930 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
PTPRN-213ENST00000476930 SULF1Q8IWU6 871 aa14.06□□□□□ -0.16
PTPRN-213ENST00000476930 NOB1Q9ULX3 412 aaKnown RBP14.06□□□□□ -0.16
PTPRN-213ENST00000476930 CASP8AP2Q9UKL3 1982 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 CT47B1P0C2W7 299 aaPredicted RBP14.05□□□□□ -0.16
PTPRN-213ENST00000476930 ECE1P42892 770 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 LRRC24Q50LG9 513 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 CERS5Q8N5B7 392 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 KLHDC4Q8TBB5 520 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 JAG2Q9Y219 1238 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 RIPOR2Q9Y4F9 1068 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 AKAP11Q9UKA4 1901 aa14.05□□□□□ -0.16
PTPRN-213ENST00000476930 SASH1O94885 1247 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 IL1R1P14778 569 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
PTPRN-213ENST00000476930 HUNKP57058 714 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 CDCA5Q96FF9 252 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 HHIPL1Q96JK4 782 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 GBA2Q9HCG7 927 aaPredicted RBP14.04□□□□□ -0.16
PTPRN-213ENST00000476930 ARAP2Q8WZ64 1704 aa14.04□□□□□ -0.16
PTPRN-213ENST00000476930 WNT10BO00744 389 aa14.03□□□□□ -0.16
PTPRN-213ENST00000476930 GYG1P46976 350 aa14.03□□□□□ -0.16
PTPRN-213ENST00000476930 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
PTPRN-213ENST00000476930 MAP2K1Q02750 393 aaPredicted RBP14.03□□□□□ -0.16
PTPRN-213ENST00000476930 MROH5Q6ZUA9 1318 aa14.02□□□□□ -0.17
PTPRN-213ENST00000476930 PITPNM2Q9BZ72 1349 aa14.02□□□□□ -0.17
PTPRN-213ENST00000476930 CTCFP49711 727 aaPredicted RBP14.02□□□□□ -0.17
PTPRN-213ENST00000476930 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
PTPRN-213ENST00000476930 PRAMEF18Q5VWM3 479 aa14.02□□□□□ -0.17
PTPRN-213ENST00000476930 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms