RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
ITGA4-208ENST00000476824 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
ITGA4-208ENST00000476824 OSMRQ99650 979 aa6.62□□□□□ -1.35
ITGA4-208ENST00000476824 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
ITGA4-208ENST00000476824 DCTN4Q9UJW0 460 aa6.62□□□□□ -1.35
ITGA4-208ENST00000476824 AMOTL2Q9Y2J4 779 aa6.62□□□□□ -1.35
ITGA4-208ENST00000476824 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 SELPP16109 830 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 EPHA1P21709 976 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 RAC1P63000 192 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 PDE3BQ13370 1112 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 ALYREFQ86V81 257 aaKnown RBP6.61□□□□□ -1.35
ITGA4-208ENST00000476824 PMEPA1Q969W9 287 aa6.61□□□□□ -1.35
ITGA4-208ENST00000476824 METTL12A8MUP2 240 aa6.6□□□□□ -1.35
ITGA4-208ENST00000476824 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
ITGA4-208ENST00000476824 CDC27P30260 824 aa6.6□□□□□ -1.35
ITGA4-208ENST00000476824 CITED4Q96RK1 184 aa6.6□□□□□ -1.35
ITGA4-208ENST00000476824 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
ITGA4-208ENST00000476824 APBA3O96018 575 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 PROCP04070 461 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 EDN3P14138 238 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 ELNP15502 786 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 SETDB1Q15047 1291 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 FBXO11Q86XK2 927 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 GALNT12Q8IXK2 581 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 GALNT11Q8NCW6 608 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 CARD10Q9BWT7 1032 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 PPME1Q9Y570 386 aa6.59□□□□□ -1.35
ITGA4-208ENST00000476824 A0A1W2PP55 124 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 MSTNO14793 375 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
ITGA4-208ENST00000476824 PTPRAP18433 802 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 HGSNATQ68CP4 663 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 TMEM102Q8N9M5 508 aaPredicted RBP6.58□□□□□ -1.36
ITGA4-208ENST00000476824 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 NPHS2Q9NP85 383 aa6.58□□□□□ -1.36
ITGA4-208ENST00000476824 DSC3Q14574 896 aa6.57□□□□□ -1.36
ITGA4-208ENST00000476824 DTWD1Q8N5C7 304 aa6.57□□□□□ -1.36
ITGA4-208ENST00000476824 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
ITGA4-208ENST00000476824 ADAM19Q9H013 955 aa6.57□□□□□ -1.36
ITGA4-208ENST00000476824 DLL1O00548 723 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 TM4SF5O14894 197 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 PI16Q6UXB8 463 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
ITGA4-208ENST00000476824 CCDC74AQ96AQ1 378 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
ITGA4-208ENST00000476824 TCF12Q99081 682 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 KCNK4Q9NYG8 393 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 SOX13Q9UN79 622 aa6.56□□□□□ -1.36
ITGA4-208ENST00000476824 FSCN2O14926 492 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 DDX3YO15523 660 aaKnown RBP6.55□□□□□ -1.36
ITGA4-208ENST00000476824 TREHO43280 583 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 NEFLP07196 543 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 GRIA4P48058 902 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 MBTPS1Q14703 1052 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 SPRED3Q2MJR0 410 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 VN1R5Q7Z5H4 357 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
ITGA4-208ENST00000476824 SETDB2Q96T68 719 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
ITGA4-208ENST00000476824 MUC3BQ9H195 1237 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 USP21Q9UK80 565 aa6.55□□□□□ -1.36
ITGA4-208ENST00000476824 PATL2C9JE40 543 aaKnown RBP6.54□□□□□ -1.36
ITGA4-208ENST00000476824 H3BRJ5 948 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 ALX3O95076 343 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 WISP1O95388 367 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 GATA4P43694 442 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 PLCB3Q01970 1234 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 DOC2BQ14184 412 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 ADGRE1Q14246 886 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 FOXD4L6Q3SYB3 417 aaPredicted RBP6.54□□□□□ -1.36
ITGA4-208ENST00000476824 FOXD4L3Q6VB84 417 aaPredicted RBP6.54□□□□□ -1.36
ITGA4-208ENST00000476824 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.36
ITGA4-208ENST00000476824 CCNJLQ8IV13 435 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 CACTIN-AS1Q8N1I8 211 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 BSNDQ8WZ55 320 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 KLHDC7BQ96G42 594 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 DNAJC25Q9H1X3 360 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
ITGA4-208ENST00000476824 PNMA6FA0A0J9YX94 578 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 C9orf172C9J069 976 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 IGHA1P01876 353 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 MAPK8P45983 427 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 KIAA0319Q5VV43 1072 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
ITGA4-208ENST00000476824 ASB16Q96NS5 453 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 EHD4Q9H223 541 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 WWC3Q9ULE0 1092 aa6.53□□□□□ -1.36
ITGA4-208ENST00000476824 A0A096LPE4 126 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 A0A1W2PPZ6 126 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 SOX1O00570 391 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 ADAM11O75078 769 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 GADD45BO75293 160 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 NOS3P29474 1203 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms