RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-213ENST00000476777 ATP2B4P23634 1241 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 SREBF2Q12772 1141 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 RIC3Q7Z5B4 369 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 CCDC146Q8IYE0 955 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 GCC1Q96CN9 775 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 MXD3Q9BW11 206 aa14.77□□□□□ -0.05
BRCA1-213ENST00000476777 TRIOBPQ9H2D6 2365 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 WNT10BO00744 389 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 PDE8AO60658 829 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 NF2P35240 595 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
BRCA1-213ENST00000476777 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 DACT2Q5SW24 774 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 CCDC191Q8NCU4 936 aa14.76□□□□□ -0.05
BRCA1-213ENST00000476777 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-213ENST00000476777 OGFOD1Q8N543 542 aa14.75□□□□□ -0.05
BRCA1-213ENST00000476777 MYD88Q99836 296 aa14.75□□□□□ -0.05
BRCA1-213ENST00000476777 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
BRCA1-213ENST00000476777 MED23Q9ULK4 1368 aa14.74□□□□□ -0.05
BRCA1-213ENST00000476777 LDLRAD1Q5T700 205 aa14.74□□□□□ -0.05
BRCA1-213ENST00000476777 SPRYD7Q5W111 196 aa14.74□□□□□ -0.05
BRCA1-213ENST00000476777 SASH1O94885 1247 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 RALBP1Q15311 655 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 HABP4Q5JVS0 413 aaKnown RBP14.73□□□□□ -0.05
BRCA1-213ENST00000476777 STRIP1Q5VSL9 837 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 ARMC9Q7Z3E5 817 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 RUNDC1Q96C34 613 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 CWC25Q9NXE8 425 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-213ENST00000476777 MINPP1Q9UNW1 487 aa14.73□□□□□ -0.05
BRCA1-213ENST00000476777 ZNF646O15015 1829 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-213ENST00000476777 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
BRCA1-213ENST00000476777 ALDH1A1P00352 501 aa14.72□□□□□ -0.05
BRCA1-213ENST00000476777 MMP14P50281 582 aa14.72□□□□□ -0.05
BRCA1-213ENST00000476777 PRKG1Q13976 671 aa14.72□□□□□ -0.05
BRCA1-213ENST00000476777 CDC5LQ99459 802 aaKnown RBP14.72□□□□□ -0.05
BRCA1-213ENST00000476777 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-213ENST00000476777 BSDC1Q9NW68 430 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-213ENST00000476777 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 ZNF853P0CG23 659 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 CCT4P50991 539 aaKnown RBP14.71□□□□□ -0.05
BRCA1-213ENST00000476777 CTSWP56202 376 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 FBXW7Q969H0 707 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 ZBED3Q96IU2 234 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-213ENST00000476777 METTL22Q9BUU2 404 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-213ENST00000476777 COA1Q9GZY4 146 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 ANGEL1Q9UNK9 670 aaKnown RBP14.71□□□□□ -0.05
BRCA1-213ENST00000476777 TRIM17Q9Y577 477 aa14.71□□□□□ -0.05
BRCA1-213ENST00000476777 INTS3Q68E01 1043 aaKnown RBP14.7□□□□□ -0.06
BRCA1-213ENST00000476777 OTOP1Q7RTM1 612 aa14.7□□□□□ -0.06
BRCA1-213ENST00000476777 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
BRCA1-213ENST00000476777 APOBEC3FQ8IUX4 373 aaKnown RBP14.7□□□□□ -0.06
BRCA1-213ENST00000476777 TTLL11Q8NHH1 800 aa14.7□□□□□ -0.06
BRCA1-213ENST00000476777 GREM2Q9H772 168 aa14.7□□□□□ -0.06
BRCA1-213ENST00000476777 FZD1Q9UP38 647 aa14.7□□□□□ -0.06
BRCA1-213ENST00000476777 RANBP2P49792 3224 aaKnown RBP14.7□□□□□ -0.06
BRCA1-213ENST00000476777 SZT2Q5T011 3432 aa14.69□□□□□ -0.06
BRCA1-213ENST00000476777 MANSC4A6NHS7 340 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-213ENST00000476777 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-213ENST00000476777 INHBEP58166 350 aa14.69□□□□□ -0.06
BRCA1-213ENST00000476777 TTLL5Q6EMB2 1281 aa14.69□□□□□ -0.06
BRCA1-213ENST00000476777 IGF2BP3O00425 579 aaKnown RBP eCLIP14.68□□□□□ -0.06
BRCA1-213ENST00000476777 MAP3K11Q16584 847 aa14.68□□□□□ -0.06
BRCA1-213ENST00000476777 KIAA0825Q8IV33 1275 aa14.68□□□□□ -0.06
BRCA1-213ENST00000476777 SLC10A4Q96EP9 437 aa14.68□□□□□ -0.06
BRCA1-213ENST00000476777 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
BRCA1-213ENST00000476777 MYH3P11055 1940 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 IGKV5-2P06315 115 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 ZBTB48P10074 688 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-213ENST00000476777 KLRK1P26718 216 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 WNK4Q96J92 1243 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 ADAMTS8Q9UP79 889 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 MAP3K2Q9Y2U5 619 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 LEMD3Q9Y2U8 911 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
BRCA1-213ENST00000476777 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 SSC5DA1L4H1 1573 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 COL1A1P02452 1464 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-213ENST00000476777 DDX58O95786 925 aaKnown RBP14.66□□□□□ -0.06
BRCA1-213ENST00000476777 KCNA4P22459 653 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 C8orf58Q8NAV2 365 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 ARMC5Q96C12 935 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 IFT57Q9NWB7 429 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
BRCA1-213ENST00000476777 DSG3P32926 999 aa14.65□□□□□ -0.06
BRCA1-213ENST00000476777 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
BRCA1-213ENST00000476777 GTF2IP78347 998 aa14.65□□□□□ -0.06
BRCA1-213ENST00000476777 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
BRCA1-213ENST00000476777 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
BRCA1-213ENST00000476777 RBBP6Q7Z6E9 1792 aaKnown RBP14.65□□□□□ -0.06
BRCA1-213ENST00000476777 MYBBP1AQ9BQG0 1328 aaKnown RBP14.65□□□□□ -0.06
BRCA1-213ENST00000476777 PI4KAP2A4QPH2 592 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 UNCXA6NJT0 531 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 PPP1R12BO60237 982 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-213ENST00000476777 EN2P19622 333 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms