RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
NUP58-209ENST00000476553 ABI1Q8IZP0 508 aa10.27□□□□□ -0.77
NUP58-209ENST00000476553 RASSF4Q9H2L5 321 aa10.27□□□□□ -0.77
NUP58-209ENST00000476553 HIF3AQ9Y2N7 669 aa10.27□□□□□ -0.77
NUP58-209ENST00000476553 DDX3YO15523 660 aaKnown RBP10.26□□□□□ -0.77
NUP58-209ENST00000476553 BMP3P12645 472 aa10.26□□□□□ -0.77
NUP58-209ENST00000476553 FAM26DQ5JW98 314 aa10.26□□□□□ -0.77
NUP58-209ENST00000476553 ANKRD34AQ69YU3 496 aa10.26□□□□□ -0.77
NUP58-209ENST00000476553 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
NUP58-209ENST00000476553 HOXA10P31260 410 aaPredicted RBP10.25□□□□□ -0.77
NUP58-209ENST00000476553 FAM117BQ6P1L5 589 aa10.25□□□□□ -0.77
NUP58-209ENST00000476553 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
NUP58-209ENST00000476553 SPACA7Q96KW9 195 aa10.25□□□□□ -0.77
NUP58-209ENST00000476553 CDC25BP30305 580 aa10.24□□□□□ -0.77
NUP58-209ENST00000476553 SEC31BQ9NQW1 1179 aa10.24□□□□□ -0.77
NUP58-209ENST00000476553 MSMPQ1L6U9 139 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 OGFOD2Q6N063 350 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 KLHDC7BQ96G42 594 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 ADAM19Q9H013 955 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 KCNF1Q9H3M0 494 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 PIM2Q9P1W9 311 aa10.23□□□□□ -0.77
NUP58-209ENST00000476553 WDR64B1ANS9 1081 aa10.22□□□□□ -0.77
NUP58-209ENST00000476553 BRD2P25440 801 aaKnown RBP10.22□□□□□ -0.77
NUP58-209ENST00000476553 CBLL1Q75N03 491 aa10.22□□□□□ -0.77
NUP58-209ENST00000476553 WNT8BQ93098 351 aa10.22□□□□□ -0.77
NUP58-209ENST00000476553 SAP130Q9H0E3 1048 aa10.22□□□□□ -0.77
NUP58-209ENST00000476553 RNF208Q9H0X6 261 aa10.22□□□□□ -0.77
NUP58-209ENST00000476553 SH2B1Q9NRF2 756 aaPredicted RBP10.22□□□□□ -0.77
NUP58-209ENST00000476553 A6NJR5 290 aa10.21□□□□□ -0.77
NUP58-209ENST00000476553 TNFRSF10BO14763 440 aa10.21□□□□□ -0.77
NUP58-209ENST00000476553 SART1O43290 800 aaKnown RBP10.21□□□□□ -0.77
NUP58-209ENST00000476553 PTPRAP18433 802 aa10.21□□□□□ -0.77
NUP58-209ENST00000476553 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
NUP58-209ENST00000476553 C16orf46Q6P387 395 aa10.21□□□□□ -0.77
NUP58-209ENST00000476553 PIK3R5Q8WYR1 880 aa10.21□□□□□ -0.77
NUP58-209ENST00000476553 H3BRJ5 948 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 PIP4K2BP78356 416 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 NFXL1Q6ZNB6 911 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 CEP120Q8N960 986 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 FAM200AQ8TCP9 573 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 MFSD14AQ96MC6 490 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
NUP58-209ENST00000476553 PRNPP04156 253 aa10.19□□□□□ -0.78
NUP58-209ENST00000476553 SCNN1AP37088 669 aa10.19□□□□□ -0.78
NUP58-209ENST00000476553 CPSF6Q16630 551 aaKnown RBP eCLIP10.19□□□□□ -0.78
NUP58-209ENST00000476553 CALR3Q96L12 384 aaKnown RBP10.19□□□□□ -0.78
NUP58-209ENST00000476553 ZMYND15Q9H091 742 aa10.19□□□□□ -0.78
NUP58-209ENST00000476553 OCLNQ16625 522 aa10.18□□□□□ -0.78
NUP58-209ENST00000476553 TTC39BQ5VTQ0 682 aaPredicted RBP10.18□□□□□ -0.78
NUP58-209ENST00000476553 POU5F2Q8N7G0 328 aa10.18□□□□□ -0.78
NUP58-209ENST00000476553 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
NUP58-209ENST00000476553 OSGEPQ9NPF4 335 aa10.18□□□□□ -0.78
NUP58-209ENST00000476553 ABI2Q9NYB9 513 aaPredicted RBP10.18□□□□□ -0.78
NUP58-209ENST00000476553 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
NUP58-209ENST00000476553 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
NUP58-209ENST00000476553 CYP2E1P05181 493 aaPredicted RBP10.17□□□□□ -0.78
NUP58-209ENST00000476553 FOSL1P15407 271 aa10.17□□□□□ -0.78
NUP58-209ENST00000476553 RUSC1Q9BVN2 902 aa10.17□□□□□ -0.78
NUP58-209ENST00000476553 CCDC39Q9UFE4 941 aa10.17□□□□□ -0.78
NUP58-209ENST00000476553 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
NUP58-209ENST00000476553 FDX2Q6P4F2 183 aa10.16□□□□□ -0.78
NUP58-209ENST00000476553 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
NUP58-209ENST00000476553 F13BP05160 661 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 C8AP07357 584 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 ITGB5P18084 799 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 MAP4P27816 1152 aaKnown RBP10.15□□□□□ -0.78
NUP58-209ENST00000476553 ZAP70P43403 619 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 VSIG10LQ86VR7 867 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
NUP58-209ENST00000476553 MEGF11A6BM72 1044 aa10.14□□□□□ -0.79
NUP58-209ENST00000476553 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
NUP58-209ENST00000476553 NLRP12P59046 1061 aa10.14□□□□□ -0.79
NUP58-209ENST00000476553 SGO2Q562F6 1265 aa10.14□□□□□ -0.79
NUP58-209ENST00000476553 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
NUP58-209ENST00000476553 LEMD3Q9Y2U8 911 aa10.14□□□□□ -0.79
NUP58-209ENST00000476553 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
NUP58-209ENST00000476553 FAM177BA6PVY3 158 aa10.13□□□□□ -0.79
NUP58-209ENST00000476553 CABP4P57796 275 aa10.13□□□□□ -0.79
NUP58-209ENST00000476553 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
NUP58-209ENST00000476553 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
NUP58-209ENST00000476553 PRMT3O60678 531 aa10.12□□□□□ -0.79
NUP58-209ENST00000476553 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
NUP58-209ENST00000476553 FBXL18Q96ME1 805 aa10.12□□□□□ -0.79
NUP58-209ENST00000476553 ATG3Q9NT62 314 aa10.12□□□□□ -0.79
NUP58-209ENST00000476553 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
NUP58-209ENST00000476553 NFKBIEO00221 500 aa10.11□□□□□ -0.79
NUP58-209ENST00000476553 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
NUP58-209ENST00000476553 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
NUP58-209ENST00000476553 OSBPL1AQ9BXW6 950 aa10.11□□□□□ -0.79
NUP58-209ENST00000476553 TIAF1O95411 115 aa10.1□□□□□ -0.79
NUP58-209ENST00000476553 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
NUP58-209ENST00000476553 CAPN12Q6ZSI9 719 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 FBXL6Q8N531 539 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 KRTAP4-2Q9BYR5 136 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 SUGCTQ9HAC7 445 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms