RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
MRPL55-228ENST00000476267 GCKRQ14397 625 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 DACT2Q5SW24 774 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 DCAF8Q5TAQ9 597 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 USP17L1Q7RTZ2 530 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 UBE3BQ7Z3V4 1068 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 SULF1Q8IWU6 871 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
MRPL55-228ENST00000476267 CSF1RP07333 972 aa16.82■□□□□ 0.28
MRPL55-228ENST00000476267 FLIIQ13045 1269 aa16.82■□□□□ 0.28
MRPL55-228ENST00000476267 TXNRD3Q86VQ6 643 aa16.82■□□□□ 0.28
MRPL55-228ENST00000476267 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
MRPL55-228ENST00000476267 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
MRPL55-228ENST00000476267 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 IRS2Q9Y4H2 1338 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 VAMP4O75379 141 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 RGS19P49795 217 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-228ENST00000476267 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-228ENST00000476267 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 MCOLN1Q9GZU1 580 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 LEMD3Q9Y2U8 911 aa16.8■□□□□ 0.28
MRPL55-228ENST00000476267 ITGA6P23229 1130 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 KLRK1P26718 216 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 FKBP1BP68106 108 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 RASAL3Q86YV0 1011 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
MRPL55-228ENST00000476267 MYO3BQ8WXR4 1341 aa16.78■□□□□ 0.28
MRPL55-228ENST00000476267 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
MRPL55-228ENST00000476267 NBPF9Q3BBW0 867 aa16.78■□□□□ 0.28
MRPL55-228ENST00000476267 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
MRPL55-228ENST00000476267 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
MRPL55-228ENST00000476267 RNF186Q9NXI6 227 aa16.78■□□□□ 0.28
MRPL55-228ENST00000476267 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
MRPL55-228ENST00000476267 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.28
MRPL55-228ENST00000476267 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
MRPL55-228ENST00000476267 WNT10BO00744 389 aa16.77■□□□□ 0.28
MRPL55-228ENST00000476267 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-228ENST00000476267 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
MRPL55-228ENST00000476267 LAMB1P07942 1786 aa16.77■□□□□ 0.27
MRPL55-228ENST00000476267 TNRC18O15417 2968 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-228ENST00000476267 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
MRPL55-228ENST00000476267 FOXO4P98177 505 aa16.76■□□□□ 0.27
MRPL55-228ENST00000476267 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
MRPL55-228ENST00000476267 MOB2Q70IA6 237 aa16.76■□□□□ 0.27
MRPL55-228ENST00000476267 ZBED3Q96IU2 234 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-228ENST00000476267 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
MRPL55-228ENST00000476267 MRS2Q9HD23 443 aa16.76■□□□□ 0.27
MRPL55-228ENST00000476267 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-228ENST00000476267 MMP14P50281 582 aa16.75■□□□□ 0.27
MRPL55-228ENST00000476267 CHRNDQ07001 517 aa16.75■□□□□ 0.27
MRPL55-228ENST00000476267 DGKZQ13574 1117 aa16.75■□□□□ 0.27
MRPL55-228ENST00000476267 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
MRPL55-228ENST00000476267 TRPA1O75762 1119 aa16.74■□□□□ 0.27
MRPL55-228ENST00000476267 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
MRPL55-228ENST00000476267 F6X3S4 739 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 SNAP23O00161 211 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 SASH1O94885 1247 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 PRAMEF18Q5VWM3 479 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 TTLL5Q6EMB2 1281 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-228ENST00000476267 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 CD209Q9NNX6 404 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
MRPL55-228ENST00000476267 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-228ENST00000476267 ANKRD18BA2A2Z9 1011 aa16.72■□□□□ 0.27
MRPL55-228ENST00000476267 CERS5Q8N5B7 392 aa16.72■□□□□ 0.27
MRPL55-228ENST00000476267 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 GTF2IP78347 998 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 EPHA10Q5JZY3 1008 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 KIAA0825Q8IV33 1275 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 FBXW7Q969H0 707 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 SSC5DA1L4H1 1573 aa16.71■□□□□ 0.27
MRPL55-228ENST00000476267 TAF5LO75529 589 aa16.7■□□□□ 0.26
MRPL55-228ENST00000476267 IL1R1P14778 569 aa16.7■□□□□ 0.26
MRPL55-228ENST00000476267 MLLT1Q03111 559 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-228ENST00000476267 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
MRPL55-228ENST00000476267 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-228ENST00000476267 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
MRPL55-228ENST00000476267 APOBEC3FQ8IUX4 373 aaKnown RBP16.69■□□□□ 0.26
MRPL55-228ENST00000476267 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-228ENST00000476267 GRM8O00222 908 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 ANP32CO43423 234 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 TM4SF4P48230 202 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 LMBR1LQ6UX01 489 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 ZNF521Q96K83 1311 aa16.68■□□□□ 0.26
MRPL55-228ENST00000476267 KCNJ4P48050 445 aa16.67■□□□□ 0.26
MRPL55-228ENST00000476267 FKBP1AP62942 108 aaKnown RBP16.67■□□□□ 0.26
MRPL55-228ENST00000476267 LDLRAD1Q5T700 205 aa16.67■□□□□ 0.26
MRPL55-228ENST00000476267 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
MRPL55-228ENST00000476267 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-228ENST00000476267 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
MRPL55-228ENST00000476267 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
MRPL55-228ENST00000476267 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms