RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 CLCN1P35523 988 aa10.57□□□□□ -0.72
CCDC66-216ENST00000476142 CCT2P78371 535 aaKnown RBP10.57□□□□□ -0.72
CCDC66-216ENST00000476142 SCRN1Q12765 414 aa10.57□□□□□ -0.72
CCDC66-216ENST00000476142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC66-216ENST00000476142 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
CCDC66-216ENST00000476142 CDHR2Q9BYE9 1310 aa10.57□□□□□ -0.72
CCDC66-216ENST00000476142 DDB1Q16531 1140 aa10.56□□□□□ -0.72
CCDC66-216ENST00000476142 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
CCDC66-216ENST00000476142 RIPOR2Q9Y4F9 1068 aa10.56□□□□□ -0.72
CCDC66-216ENST00000476142 GIMAP6Q6P9H5 292 aa10.56□□□□□ -0.72
CCDC66-216ENST00000476142 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
CCDC66-216ENST00000476142 COL14A1Q05707 1796 aaKnown RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 GOLGA6L4A6NEF3 574 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 PDE8AO60658 829 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 PUS7LQ9H0K6 701 aaKnown RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 NCOA5Q9HCD5 579 aaKnown RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 UBN2Q6ZU65 1347 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 TCHHQ07283 1943 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 ZFYP08048 801 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
CCDC66-216ENST00000476142 MCAMP43121 646 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 SPATA32Q96LK8 384 aa10.55□□□□□ -0.72
CCDC66-216ENST00000476142 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 LETM1O95202 739 aaPredicted RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 MSNP26038 577 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 IMMTQ16891 758 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 ROBO1Q9Y6N7 1651 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 ITGB4P16144 1822 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 PFKFB2O60825 505 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 ZSCAN30Q86W11 494 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 CERKQ8TCT0 537 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 APPBP2Q92624 585 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 ERVV-1B6SEH8 477 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 GPAA1O43292 621 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 PTMAP06454 111 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 EXOSC10Q01780 885 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 CEBPZQ03701 1054 aaKnown RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 SLC9C2Q5TAH2 1124 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 NAP1L5Q96NT1 182 aaPredicted RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 GPHNQ9NQX3 736 aaPredicted RBP10.54□□□□□ -0.72
CCDC66-216ENST00000476142 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
CCDC66-216ENST00000476142 LRP6O75581 1613 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PDE8BO95263 885 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 FGAP02671 866 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 APPP05067 770 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PHKA1P46020 1223 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 CAMK4Q16566 473 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PDLIM2Q96JY6 352 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 SPATA31A1Q5TZJ5 1347 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 GUCY1B3Q02153 619 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
CCDC66-216ENST00000476142 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 ZNF34Q8IZ26 560 aa10.53□□□□□ -0.72
CCDC66-216ENST00000476142 NSUN7Q8NE18 718 aaKnown RBP10.53□□□□□ -0.72
CCDC66-216ENST00000476142 SCAND2PQ9GZW5 306 aaPredicted RBP10.53□□□□□ -0.72
CCDC66-216ENST00000476142 PIH1D3Q9NQM4 214 aaKnown RBP10.53□□□□□ -0.72
CCDC66-216ENST00000476142 SNAP23O00161 211 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 FOXP2O15409 715 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 LIG1P18858 919 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 RALYLQ86SE5 291 aaKnown RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 MARCH10Q8NA82 808 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 BICD2Q8TD16 824 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 ZNF213O14771 459 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 CTDNEP1O95476 244 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 PDIA3P30101 505 aaKnown RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 SIK1P57059 783 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 RESTQ13127 1097 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 ZSCAN25Q6NSZ9 544 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 VGLL2Q8N8G2 317 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 LLPHQ9BRT6 129 aaKnown RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 UTP14AQ9BVJ6 771 aaKnown RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 USP25Q9UHP3 1055 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
CCDC66-216ENST00000476142 COL16A1Q07092 1604 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-216ENST00000476142 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.51□□□□□ -0.73
CCDC66-216ENST00000476142 PRC1O43663 620 aa10.51□□□□□ -0.73
CCDC66-216ENST00000476142 EIF5P55010 431 aaKnown RBP10.51□□□□□ -0.73
CCDC66-216ENST00000476142 MPNDQ8N594 471 aa10.51□□□□□ -0.73
CCDC66-216ENST00000476142 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
CCDC66-216ENST00000476142 NUP62CLQ9H1M0 184 aa10.51□□□□□ -0.73
CCDC66-216ENST00000476142 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms