RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	SUCLG2	Q96I99	432 aa		31.2	■■■□□ 2.59
NBPF3-208	ENST00000475869	GML	Q99445	158 aa		31.2	■■■□□ 2.59
NBPF3-208	ENST00000475869	ZNF280A	P59817	542 aa	Predicted RBP	31.19	■■■□□ 2.58
NBPF3-208	ENST00000475869	CCDC57	Q2TAC2	916 aa		31.19	■■■□□ 2.58
NBPF3-208	ENST00000475869	RBM26	Q5T8P6	1007 aa	Known RBP	31.19	■■■□□ 2.58
NBPF3-208	ENST00000475869	COA1	Q9GZY4	146 aa		31.19	■■■□□ 2.58
NBPF3-208	ENST00000475869	KIF4B	Q2VIQ3	1234 aa		31.18	■■■□□ 2.58
NBPF3-208	ENST00000475869	KCNJ4	P48050	445 aa		31.17	■■■□□ 2.58
NBPF3-208	ENST00000475869	ZNF594	Q96JF6	807 aa	Predicted RBP	31.17	■■■□□ 2.58
NBPF3-208	ENST00000475869	SMC4	Q9NTJ3	1288 aa		31.17	■■■□□ 2.58
NBPF3-208	ENST00000475869	TAF5L	O75529	589 aa		31.16	■■■□□ 2.58
NBPF3-208	ENST00000475869	CELF2	O95319	508 aa	Known RBP	31.16	■■■□□ 2.58
NBPF3-208	ENST00000475869	DACT2	Q5SW24	774 aa		31.16	■■■□□ 2.58
NBPF3-208	ENST00000475869	HELB	Q8NG08	1087 aa	Predicted RBP	31.16	■■■□□ 2.58
NBPF3-208	ENST00000475869	IRS2	Q9Y4H2	1338 aa		31.16	■■■□□ 2.58
NBPF3-208	ENST00000475869	CT47B1	P0C2W7	299 aa	Predicted RBP	31.15	■■■□□ 2.58
NBPF3-208	ENST00000475869	USP48	Q86UV5	1035 aa		31.15	■■■□□ 2.58
NBPF3-208	ENST00000475869	TLL2	Q9Y6L7	1015 aa		31.15	■■■□□ 2.58
NBPF3-208	ENST00000475869	SNAP23	O00161	211 aa		31.14	■■■□□ 2.58
NBPF3-208	ENST00000475869	USP17L8	P0C7I0	530 aa		31.14	■■■□□ 2.58
NBPF3-208	ENST00000475869	TAF7L	Q5H9L4	462 aa		31.14	■■■□□ 2.58
NBPF3-208	ENST00000475869	THSD7B	Q9C0I4	1608 aa		31.13	■■■□□ 2.57
NBPF3-208	ENST00000475869	STRIP1	Q5VSL9	837 aa		31.13	■■■□□ 2.57
NBPF3-208	ENST00000475869	LDHAL6A	Q6ZMR3	332 aa		31.13	■■■□□ 2.57
NBPF3-208	ENST00000475869	C15orf52	Q6ZUT6	534 aa	Known RBP	31.13	■■■□□ 2.57
NBPF3-208	ENST00000475869	DLK2	Q6UY11	383 aa		31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	KRT26	Q7Z3Y9	468 aa		31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	DCPS	Q96C86	337 aa	Known RBP	31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	MXD3	Q9BW11	206 aa		31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	BICC1	Q9H694	974 aa	Known RBP	31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	ASTN2	O75129	1339 aa	Predicted RBP	31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	WDR33	Q9C0J8	1336 aa	Known RBP	31.12	■■■□□ 2.57
NBPF3-208	ENST00000475869	RABL6	Q3YEC7	729 aa	Predicted RBP	31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	FBXW7	Q969H0	707 aa		31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	ZNF408	Q9H9D4	720 aa		31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	MYOZ2	Q9NPC6	264 aa		31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	CNNM1	Q9NRU3	951 aa		31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	GGA3	Q9NZ52	723 aa		31.11	■■■□□ 2.57
NBPF3-208	ENST00000475869	MYO3B	Q8WXR4	1341 aa		31.1	■■■□□ 2.57
NBPF3-208	ENST00000475869	SAPCD2	Q86UD0	394 aa		31.1	■■■□□ 2.57
NBPF3-208	ENST00000475869	MIER1	Q8N108	512 aa		31.1	■■■□□ 2.57
NBPF3-208	ENST00000475869	ANKRD44	Q8N8A2	993 aa		31.1	■■■□□ 2.57
NBPF3-208	ENST00000475869	USP44	Q9H0E7	712 aa		31.1	■■■□□ 2.57
NBPF3-208	ENST00000475869	ADM5	C9JUS6	153 aa		31.09	■■■□□ 2.57
NBPF3-208	ENST00000475869	DIEXF	Q68CQ4	756 aa	Known RBP	31.09	■■■□□ 2.57
NBPF3-208	ENST00000475869	CD209	Q9NNX6	404 aa		31.09	■■■□□ 2.57
NBPF3-208	ENST00000475869	SCARF1	Q14162	830 aa		31.08	■■■□□ 2.57
NBPF3-208	ENST00000475869	TTLL5	Q6EMB2	1281 aa		31.08	■■■□□ 2.57
NBPF3-208	ENST00000475869	CAPNS2	Q96L46	248 aa		31.08	■■■□□ 2.57
NBPF3-208	ENST00000475869	BRPF1	P55201	1214 aa	Predicted RBP	31.07	■■■□□ 2.56
NBPF3-208	ENST00000475869	COL13A1	Q5TAT6	717 aa	Predicted RBP	31.07	■■■□□ 2.56
NBPF3-208	ENST00000475869	IFFO2	Q5TF58	517 aa		31.07	■■■□□ 2.56
NBPF3-208	ENST00000475869	CYP4F22	Q6NT55	531 aa		31.07	■■■□□ 2.56
NBPF3-208	ENST00000475869	PLIN1	O60240	522 aa		31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	ECE1	P42892	770 aa		31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	GTF2I	P78347	998 aa		31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	PUS3	Q9BZE2	481 aa	Known RBP	31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	NOB1	Q9ULX3	412 aa	Known RBP	31.06	■■■□□ 2.56
NBPF3-208	ENST00000475869	ANGEL2	Q5VTE6	544 aa	Known RBP	31.05	■■■□□ 2.56
NBPF3-208	ENST00000475869	SULF1	Q8IWU6	871 aa		31.05	■■■□□ 2.56
NBPF3-208	ENST00000475869	HHIPL1	Q96JK4	782 aa		31.05	■■■□□ 2.56
NBPF3-208	ENST00000475869	ZNF804A	Q7Z570	1209 aa		31.04	■■■□□ 2.56
NBPF3-208	ENST00000475869	OGFOD1	Q8N543	542 aa		31.04	■■■□□ 2.56
NBPF3-208	ENST00000475869	WBP1L	Q9NX94	342 aa		31.04	■■■□□ 2.56
NBPF3-208	ENST00000475869	RIPOR2	Q9Y4F9	1068 aa		31.04	■■■□□ 2.56
NBPF3-208	ENST00000475869	FOXN1	O15353	648 aa		31.03	■■■□□ 2.56
NBPF3-208	ENST00000475869	IL1R1	P14778	569 aa		31.03	■■■□□ 2.56
NBPF3-208	ENST00000475869	RARS	P54136	660 aa	Known RBP	31.03	■■■□□ 2.56
NBPF3-208	ENST00000475869	GRM1	Q13255	1194 aa		31.02	■■■□□ 2.56
NBPF3-208	ENST00000475869	PITPNM2	Q9BZ72	1349 aa		31.01	■■■□□ 2.56
NBPF3-208	ENST00000475869	MMP14	P50281	582 aa		31.01	■■■□□ 2.55
NBPF3-208	ENST00000475869	UBE4A	Q14139	1066 aa		31.01	■■■□□ 2.55
NBPF3-208	ENST00000475869	NBPF9	Q3BBW0	867 aa		31.01	■■■□□ 2.55
NBPF3-208	ENST00000475869	MROH5	Q6ZUA9	1318 aa		31	■■■□□ 2.55
NBPF3-208	ENST00000475869	KIAA0825	Q8IV33	1275 aa		31	■■■□□ 2.55
NBPF3-208	ENST00000475869	AIDA	Q96BJ3	306 aa		31	■■■□□ 2.55
NBPF3-208	ENST00000475869	API5	Q9BZZ5	524 aa	Known RBP	31	■■■□□ 2.55
NBPF3-208	ENST00000475869	MAP2K1	Q02750	393 aa	Predicted RBP	30.99	■■■□□ 2.55
NBPF3-208	ENST00000475869	CERS5	Q8N5B7	392 aa		30.99	■■■□□ 2.55
NBPF3-208	ENST00000475869	CDCA5	Q96FF9	252 aa		30.99	■■■□□ 2.55
NBPF3-208	ENST00000475869	GBA2	Q9HCG7	927 aa	Predicted RBP	30.99	■■■□□ 2.55
NBPF3-208	ENST00000475869	WNT10B	O00744	389 aa		30.98	■■■□□ 2.55
NBPF3-208	ENST00000475869	LRRC24	Q50LG9	513 aa		30.98	■■■□□ 2.55
NBPF3-208	ENST00000475869	AOC2	O75106	756 aa		30.97	■■■□□ 2.55
NBPF3-208	ENST00000475869	HUNK	P57058	714 aa		30.97	■■■□□ 2.55
NBPF3-208	ENST00000475869	KLHDC4	Q8TBB5	520 aa		30.97	■■■□□ 2.55
NBPF3-208	ENST00000475869	C2orf69	Q8N8R5	385 aa		30.96	■■■□□ 2.55
NBPF3-208	ENST00000475869	HDAC9	Q9UKV0	1011 aa		30.96	■■■□□ 2.55
NBPF3-208	ENST00000475869	KIF16B	Q96L93	1317 aa		30.96	■■■□□ 2.55
NBPF3-208	ENST00000475869	SASH1	O94885	1247 aa		30.95	■■■□□ 2.55
NBPF3-208	ENST00000475869	MAP2K2	P36507	400 aa		30.95	■■■□□ 2.55
NBPF3-208	ENST00000475869	VGLL2	Q8N8G2	317 aa		30.95	■■■□□ 2.55
NBPF3-208	ENST00000475869	SCAF8	Q9UPN6	1271 aa	Known RBP	30.95	■■■□□ 2.55
NBPF3-208	ENST00000475869	ECM29	Q5VYK3	1845 aa		30.94	■■■□□ 2.54
NBPF3-208	ENST00000475869	UBTFL1	P0CB47	393 aa	Predicted RBP	30.94	■■■□□ 2.54
NBPF3-208	ENST00000475869	GYG1	P46976	350 aa		30.94	■■■□□ 2.54
NBPF3-208	ENST00000475869	RFX5	P48382	616 aa	Predicted RBP	30.94	■■■□□ 2.54
NBPF3-208	ENST00000475869	CTCF	P49711	727 aa	Predicted RBP	30.94	■■■□□ 2.54
NBPF3-208	ENST00000475869	FKBP1A	P62942	108 aa	Known RBP	30.94	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms