RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 MKRN3Q13064 507 aaKnown RBP20.58■□□□□ 0.89
ITGB1-211ENST00000475184 OGFOD1Q8N543 542 aa20.58■□□□□ 0.89
ITGB1-211ENST00000475184 SREBF2Q12772 1141 aa20.57■□□□□ 0.88
ITGB1-211ENST00000475184 DACT2Q5SW24 774 aa20.57■□□□□ 0.88
ITGB1-211ENST00000475184 LAMB1P07942 1786 aa20.57■□□□□ 0.88
ITGB1-211ENST00000475184 ECM29Q5VYK3 1845 aa20.56■□□□□ 0.88
ITGB1-211ENST00000475184 WTIPA6NIX2 430 aaPredicted RBP20.56■□□□□ 0.88
ITGB1-211ENST00000475184 WNT10BO00744 389 aa20.56■□□□□ 0.88
ITGB1-211ENST00000475184 WDR43Q15061 677 aaKnown RBP eCLIP20.56■□□□□ 0.88
ITGB1-211ENST00000475184 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
ITGB1-211ENST00000475184 MXD3Q9BW11 206 aa20.56■□□□□ 0.88
ITGB1-211ENST00000475184 MYO3BQ8WXR4 1341 aa20.55■□□□□ 0.88
ITGB1-211ENST00000475184 FKTNO75072 461 aa20.55■□□□□ 0.88
ITGB1-211ENST00000475184 CTSWP56202 376 aa20.55■□□□□ 0.88
ITGB1-211ENST00000475184 CFHR5Q9BXR6 569 aa20.55■□□□□ 0.88
ITGB1-211ENST00000475184 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
ITGB1-211ENST00000475184 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
ITGB1-211ENST00000475184 STRIP1Q5VSL9 837 aa20.54■□□□□ 0.88
ITGB1-211ENST00000475184 FBXW7Q969H0 707 aa20.54■□□□□ 0.88
ITGB1-211ENST00000475184 METTL22Q9BUU2 404 aaPredicted RBP20.54■□□□□ 0.88
ITGB1-211ENST00000475184 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
ITGB1-211ENST00000475184 RBBP6Q7Z6E9 1792 aaKnown RBP20.54■□□□□ 0.88
ITGB1-211ENST00000475184 ELL2O00472 640 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-211ENST00000475184 SASH1O94885 1247 aa20.53■□□□□ 0.88
ITGB1-211ENST00000475184 ZNF853P0CG23 659 aa20.53■□□□□ 0.88
ITGB1-211ENST00000475184 ARMC9Q7Z3E5 817 aa20.53■□□□□ 0.88
ITGB1-211ENST00000475184 R3HDMLQ9H3Y0 253 aa20.53■□□□□ 0.88
ITGB1-211ENST00000475184 BSDC1Q9NW68 430 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-211ENST00000475184 BRCA2P51587 3418 aa20.52■□□□□ 0.88
ITGB1-211ENST00000475184 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
ITGB1-211ENST00000475184 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
ITGB1-211ENST00000475184 APOBEC3FQ8IUX4 373 aaKnown RBP20.52■□□□□ 0.88
ITGB1-211ENST00000475184 COA1Q9GZY4 146 aa20.52■□□□□ 0.88
ITGB1-211ENST00000475184 ADAMTS8Q9UP79 889 aa20.52■□□□□ 0.88
ITGB1-211ENST00000475184 MMP14P50281 582 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 PRKG1Q13976 671 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 GREM2Q9H772 168 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 IFT57Q9NWB7 429 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 CEP290O15078 2479 aa20.51■□□□□ 0.87
ITGB1-211ENST00000475184 LDLRAD1Q5T700 205 aa20.5■□□□□ 0.87
ITGB1-211ENST00000475184 SPRYD7Q5W111 196 aa20.5■□□□□ 0.87
ITGB1-211ENST00000475184 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
ITGB1-211ENST00000475184 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-211ENST00000475184 ALDH1A1P00352 501 aa20.49■□□□□ 0.87
ITGB1-211ENST00000475184 GNAI1P63096 354 aa20.49■□□□□ 0.87
ITGB1-211ENST00000475184 TXNRD3Q86VQ6 643 aa20.49■□□□□ 0.87
ITGB1-211ENST00000475184 ANGEL1Q9UNK9 670 aaKnown RBP20.49■□□□□ 0.87
ITGB1-211ENST00000475184 TTLL5Q6EMB2 1281 aa20.48■□□□□ 0.87
ITGB1-211ENST00000475184 KIAA0825Q8IV33 1275 aa20.48■□□□□ 0.87
ITGB1-211ENST00000475184 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
ITGB1-211ENST00000475184 IGKV5-2P06315 115 aa20.47■□□□□ 0.87
ITGB1-211ENST00000475184 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
ITGB1-211ENST00000475184 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
ITGB1-211ENST00000475184 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
ITGB1-211ENST00000475184 ZBED3Q96IU2 234 aaPredicted RBP20.47■□□□□ 0.87
ITGB1-211ENST00000475184 A0A1B0GUL6 1792 aa20.46■□□□□ 0.87
ITGB1-211ENST00000475184 MANSC4A6NHS7 340 aaPredicted RBP20.46■□□□□ 0.87
ITGB1-211ENST00000475184 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
ITGB1-211ENST00000475184 FZD1Q9UP38 647 aa20.46■□□□□ 0.87
ITGB1-211ENST00000475184 TRIM17Q9Y577 477 aa20.46■□□□□ 0.87
ITGB1-211ENST00000475184 PI4KAP2A4QPH2 592 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 KLRK1P26718 216 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
ITGB1-211ENST00000475184 INHBEP58166 350 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 KSR2Q6VAB6 950 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 OTOP1Q7RTM1 612 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 IFNL1Q8IU54 200 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 PI4KAP1Q8N8J0 262 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 SLC10A4Q96EP9 437 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 ZNF804BA4D1E1 1349 aa20.45■□□□□ 0.86
ITGB1-211ENST00000475184 SSC5DA1L4H1 1573 aa20.44■□□□□ 0.86
ITGB1-211ENST00000475184 GTF2IP78347 998 aa20.44■□□□□ 0.86
ITGB1-211ENST00000475184 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
ITGB1-211ENST00000475184 INTS3Q68E01 1043 aaKnown RBP20.44■□□□□ 0.86
ITGB1-211ENST00000475184 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
ITGB1-211ENST00000475184 OTOFQ9HC10 1997 aa20.44■□□□□ 0.86
ITGB1-211ENST00000475184 ZBTB48P10074 688 aaPredicted RBP20.43■□□□□ 0.86
ITGB1-211ENST00000475184 MAP3K11Q16584 847 aa20.43■□□□□ 0.86
ITGB1-211ENST00000475184 CWF19L2Q2TBE0 894 aaKnown RBP20.43■□□□□ 0.86
ITGB1-211ENST00000475184 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
ITGB1-211ENST00000475184 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
ITGB1-211ENST00000475184 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.43■□□□□ 0.86
ITGB1-211ENST00000475184 CACNA1FO60840 1977 aa20.43■□□□□ 0.86
ITGB1-211ENST00000475184 POTEFA5A3E0 1075 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 APAF1O14727 1248 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 DLGAP5Q15398 846 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 HABP4Q5JVS0 413 aaKnown RBP20.42■□□□□ 0.86
ITGB1-211ENST00000475184 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 CLMNQ96JQ2 1002 aa20.42■□□□□ 0.86
ITGB1-211ENST00000475184 IGF2BP3O00425 579 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGB1-211ENST00000475184 PPP1R12BO60237 982 aaPredicted RBP20.41■□□□□ 0.86
ITGB1-211ENST00000475184 ITGA6P23229 1130 aa20.41■□□□□ 0.86
ITGB1-211ENST00000475184 MPHOSPH8Q99549 860 aa20.41■□□□□ 0.86
ITGB1-211ENST00000475184 PPP2R3BQ9Y5P8 575 aa20.41■□□□□ 0.86
ITGB1-211ENST00000475184 H7C1W4 665 aa20.4■□□□□ 0.86
ITGB1-211ENST00000475184 KCNJ4P48050 445 aa20.4■□□□□ 0.86
ITGB1-211ENST00000475184 TSPYL6Q8N831 410 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms