RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
RTN4R-206ENST00000474642 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
RTN4R-206ENST00000474642 APOBEC3FQ8IUX4 373 aaKnown RBP17.25■□□□□ 0.35
RTN4R-206ENST00000474642 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
RTN4R-206ENST00000474642 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
RTN4R-206ENST00000474642 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
RTN4R-206ENST00000474642 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
RTN4R-206ENST00000474642 TRIOBPQ9H2D6 2365 aa17.24■□□□□ 0.35
RTN4R-206ENST00000474642 CEP290O15078 2479 aa17.24■□□□□ 0.35
RTN4R-206ENST00000474642 SASH1O94885 1247 aa17.24■□□□□ 0.35
RTN4R-206ENST00000474642 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
RTN4R-206ENST00000474642 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
RTN4R-206ENST00000474642 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 CHL1O00533 1208 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 PDE8AO60658 829 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
RTN4R-206ENST00000474642 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
RTN4R-206ENST00000474642 MMP14P50281 582 aa17.22■□□□□ 0.35
RTN4R-206ENST00000474642 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
RTN4R-206ENST00000474642 ARMC5Q96C12 935 aa17.22■□□□□ 0.35
RTN4R-206ENST00000474642 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
RTN4R-206ENST00000474642 FZD1Q9UP38 647 aa17.22■□□□□ 0.35
RTN4R-206ENST00000474642 RBBP6Q7Z6E9 1792 aaKnown RBP17.22■□□□□ 0.35
RTN4R-206ENST00000474642 MED23Q9ULK4 1368 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
RTN4R-206ENST00000474642 HOXB7P09629 217 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 ZBTB48P10074 688 aaPredicted RBP17.21■□□□□ 0.35
RTN4R-206ENST00000474642 GOLGA2Q08379 1002 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 OTUD7BQ6GQQ9 843 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
RTN4R-206ENST00000474642 WNK4Q96J92 1243 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 HTTP42858 3142 aa17.21■□□□□ 0.35
RTN4R-206ENST00000474642 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
RTN4R-206ENST00000474642 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
RTN4R-206ENST00000474642 CCDC191Q8NCU4 936 aa17.2■□□□□ 0.34
RTN4R-206ENST00000474642 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
RTN4R-206ENST00000474642 MYD88Q99836 296 aa17.2■□□□□ 0.34
RTN4R-206ENST00000474642 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
RTN4R-206ENST00000474642 CRHR2Q13324 411 aa17.19■□□□□ 0.34
RTN4R-206ENST00000474642 KIAA0825Q8IV33 1275 aa17.19■□□□□ 0.34
RTN4R-206ENST00000474642 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
RTN4R-206ENST00000474642 COA1Q9GZY4 146 aa17.19■□□□□ 0.34
RTN4R-206ENST00000474642 CENPFP49454 3210 aa17.19■□□□□ 0.34
RTN4R-206ENST00000474642 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
RTN4R-206ENST00000474642 SP3Q02447 781 aa17.18■□□□□ 0.34
RTN4R-206ENST00000474642 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
RTN4R-206ENST00000474642 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
RTN4R-206ENST00000474642 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
RTN4R-206ENST00000474642 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
RTN4R-206ENST00000474642 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
RTN4R-206ENST00000474642 SLC4A8Q2Y0W8 1093 aa17.17■□□□□ 0.34
RTN4R-206ENST00000474642 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
RTN4R-206ENST00000474642 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
RTN4R-206ENST00000474642 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
RTN4R-206ENST00000474642 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
RTN4R-206ENST00000474642 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
RTN4R-206ENST00000474642 CTSWP56202 376 aa17.15■□□□□ 0.34
RTN4R-206ENST00000474642 ARHGEF6Q15052 776 aa17.15■□□□□ 0.34
RTN4R-206ENST00000474642 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
RTN4R-206ENST00000474642 SLC9C1Q4G0N8 1177 aa17.15■□□□□ 0.34
RTN4R-206ENST00000474642 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
RTN4R-206ENST00000474642 PHAXQ9H814 394 aaKnown RBP17.15■□□□□ 0.34
RTN4R-206ENST00000474642 UNCXA6NJT0 531 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 H0YGN5 161 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
RTN4R-206ENST00000474642 GTF2IP78347 998 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 SUPT20HL1Q3ZLR7 823 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 LEMD3Q9Y2U8 911 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
RTN4R-206ENST00000474642 BRCA2P51587 3418 aa17.13■□□□□ 0.33
RTN4R-206ENST00000474642 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
RTN4R-206ENST00000474642 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
RTN4R-206ENST00000474642 PTCH2Q9Y6C5 1203 aa17.13■□□□□ 0.33
RTN4R-206ENST00000474642 MYO1BO43795 1136 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 MYCP01106 439 aaPredicted RBP17.12■□□□□ 0.33
RTN4R-206ENST00000474642 GJA5P36382 358 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 CAP1Q01518 475 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 PTPN18Q99952 460 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
RTN4R-206ENST00000474642 GREM2Q9H772 168 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 SPEF2Q9C093 1822 aa17.12■□□□□ 0.33
RTN4R-206ENST00000474642 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
RTN4R-206ENST00000474642 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
RTN4R-206ENST00000474642 ANKRD13AQ8IZ07 590 aa17.11■□□□□ 0.33
RTN4R-206ENST00000474642 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
RTN4R-206ENST00000474642 SSC5DA1L4H1 1573 aa17.11■□□□□ 0.33
RTN4R-206ENST00000474642 LAMB1P07942 1786 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 CLRN2A0PK11 232 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 TESPA1A2RU30 521 aaPredicted RBP17.1■□□□□ 0.33
RTN4R-206ENST00000474642 DLL1O00548 723 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
RTN4R-206ENST00000474642 KCNJ4P48050 445 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 NBPF12Q5TAG4 269 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms