RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 KCNJ4P48050 445 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 EIF6P56537 245 aaKnown RBP5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 MTX1Q13505 466 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 WASHC4Q2M389 1173 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 SPRYD3Q8NCJ5 442 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 TBC1D16Q8TBP0 767 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 TBC1D32Q96NH3 1257 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 ZC3H12CQ9C0D7 883 aaKnown RBP5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 CNNM1Q9NRU3 951 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 COL4A1P02462 1669 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 DUOX1Q9NRD9 1551 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 MED23Q9ULK4 1368 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 GLTPD2A6NH11 291 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 G3V3G9 751 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 FZD9O00144 591 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 ZBTB7BO15156 539 aaPredicted RBP5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 CIAO1O76071 339 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 PRELPP51888 382 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 MFAP1P55081 439 aaKnown RBP5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 CHRNDQ07001 517 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 AOC3Q16853 763 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 GLIPR1L2Q4G1C9 344 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 DCAF8Q5TAQ9 597 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 C15orf52Q6ZUT6 534 aaKnown RBP5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 SMC5Q8IY18 1101 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 POLLQ9UGP5 575 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNRF3Q9ULT6 936 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 A0A1B0GUL6 1792 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 WDR90Q96KV7 1748 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF804BA4D1E1 1349 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 RFX5P48382 616 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 UBE4AQ14139 1066 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 TNIP1Q15025 636 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 TBC1D2Q9BYX2 928 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 LNPKQ9C0E8 428 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 EYA2O00167 538 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 SRGAP3O43295 1099 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 IL15P40933 162 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 ATP8B2P98198 1209 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 PTPN12Q05209 780 aaKnown RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 METTL24Q5JXM2 366 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 ANKRD45Q5TZF3 282 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 GPC2Q8N158 579 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF784Q8NCA9 323 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF594Q96JF6 807 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 C22orf23Q9BZE7 217 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 COA1Q9GZY4 146 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 C1orf115Q9H7X2 142 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 GPBP1L1Q9HC44 474 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 COPRSQ9NQ92 184 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 RIPOR2Q9Y4F9 1068 aa5.11□□□□□ -1.59
GAPVD1-216ENST00000474637 IQCA1LA6NCM1 817 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 ECE2O60344 883 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 NUCB1Q02818 461 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF804AQ7Z570 1209 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 PODNQ7Z5L7 613 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 CHD1LQ86WJ1 897 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 RPAP2Q8IXW5 612 aaPredicted RBP5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 FAM43AQ8N2R8 423 aa5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 L3MBTL3Q96JM7 780 aaPredicted RBP5.1□□□□□ -1.59
GAPVD1-216ENST00000474637 RIMBP2O15034 1052 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 HMMRO75330 724 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 PDE8BO95263 885 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 RPS12P25398 132 aaKnown RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 MMP14P50281 582 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 G3BP1Q13283 466 aaKnown RBP eCLIP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 PUM3Q15397 648 aaKnown RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 CIAPIN1Q6FI81 312 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SSH3Q8TE77 659 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 PUS3Q9BZE2 481 aaKnown RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 ANTXR1Q9H6X2 564 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 CEP126Q9P2H0 1117 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 AKAP2Q9Y2D5 859 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SCN4AP35499 1836 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF541Q9H0D2 1346 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF609O15014 1411 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 PSME4Q14997 1843 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SPDYE4A6NLX3 237 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 TAF5LO75529 589 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 IFIT1P09914 478 aaKnown RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SLC5A1P13866 664 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 LMOD1P29536 600 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 LRRC24Q50LG9 513 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 HSP90AB4PQ58FF6 505 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 CEP85Q6P2H3 762 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 SIRT2Q8IXJ6 389 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 C16orf71Q8IYS4 520 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 HELBQ8NG08 1087 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 COL4A5P29400 1685 aa5.09□□□□□ -1.59
GAPVD1-216ENST00000474637 USP17L3A6NCW0 530 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 USP17L4A6NCW7 530 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 VEGFAP15692 232 aaPredicted RBP5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 CXCL9Q07325 125 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 DOK7Q18PE1 504 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 CAVIN4Q5BKX8 364 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 USP17L1Q7RTZ2 530 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 ATG9AQ7Z3C6 839 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 ERC1Q8IUD2 1116 aa5.08□□□□□ -1.6
GAPVD1-216ENST00000474637 VGLL2Q8N8G2 317 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms