RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HIRAP54198 1017 aaPredicted RBP20.07■□□□□ 0.8
ITGB1-210ENST00000474568 LRRC24Q50LG9 513 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 ATF7IPQ6VMQ6 1270 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 USP17L1Q7RTZ2 530 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 COA1Q9GZY4 146 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
ITGB1-210ENST00000474568 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
ITGB1-210ENST00000474568 ITGBL1O95965 494 aaPredicted RBP20.06■□□□□ 0.8
ITGB1-210ENST00000474568 EGFRP00533 1210 aa20.06■□□□□ 0.8
ITGB1-210ENST00000474568 RPS12P25398 132 aaKnown RBP20.06■□□□□ 0.8
ITGB1-210ENST00000474568 FMR1Q06787 632 aaKnown RBP eCLIP20.06■□□□□ 0.8
ITGB1-210ENST00000474568 RSBN1LQ6PCB5 846 aaPredicted RBP20.06■□□□□ 0.8
ITGB1-210ENST00000474568 DPF2Q92785 391 aa20.06■□□□□ 0.8
ITGB1-210ENST00000474568 PASKQ96RG2 1323 aa20.05■□□□□ 0.8
ITGB1-210ENST00000474568 ZKSCAN2Q63HK3 967 aa20.05■□□□□ 0.8
ITGB1-210ENST00000474568 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
ITGB1-210ENST00000474568 ADAMTSL1Q8N6G6 1762 aa20.05■□□□□ 0.8
ITGB1-210ENST00000474568 SCN9AQ15858 1988 aa20.04■□□□□ 0.8
ITGB1-210ENST00000474568 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
ITGB1-210ENST00000474568 RIPOR2Q9Y4F9 1068 aa20.04■□□□□ 0.8
ITGB1-210ENST00000474568 IRS2Q9Y4H2 1338 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 TRAF5O00463 557 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 GTF2IP78347 998 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 DNAJC5GQ8N7S2 189 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 CD209Q9NNX6 404 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 JAG2Q9Y219 1238 aa20.03■□□□□ 0.8
ITGB1-210ENST00000474568 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
ITGB1-210ENST00000474568 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.8
ITGB1-210ENST00000474568 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
ITGB1-210ENST00000474568 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
ITGB1-210ENST00000474568 AGBL3Q8NEM8 1001 aa20.02■□□□□ 0.8
ITGB1-210ENST00000474568 GLIS2Q9BZE0 524 aaPredicted RBP20.02■□□□□ 0.8
ITGB1-210ENST00000474568 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.79
ITGB1-210ENST00000474568 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
ITGB1-210ENST00000474568 TTLL5Q6EMB2 1281 aa20.01■□□□□ 0.79
ITGB1-210ENST00000474568 ZNF804AQ7Z570 1209 aa20.01■□□□□ 0.79
ITGB1-210ENST00000474568 GMLQ99445 158 aa20.01■□□□□ 0.79
ITGB1-210ENST00000474568 SIL1Q9H173 461 aa20.01■□□□□ 0.79
ITGB1-210ENST00000474568 GNAI3P08754 354 aa20■□□□□ 0.79
ITGB1-210ENST00000474568 USP17L8P0C7I0 530 aa20■□□□□ 0.79
ITGB1-210ENST00000474568 GYG1P46976 350 aa20■□□□□ 0.79
ITGB1-210ENST00000474568 PTPN12Q05209 780 aaKnown RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 C15orf52Q6ZUT6 534 aaKnown RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 KLRG1Q96E93 195 aa20■□□□□ 0.79
ITGB1-210ENST00000474568 CREBZFQ9NS37 354 aa20■□□□□ 0.79
ITGB1-210ENST00000474568 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 PA2G4Q9UQ80 394 aaKnown RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 ASTN2O75129 1339 aaPredicted RBP20■□□□□ 0.79
ITGB1-210ENST00000474568 TMEM88BA6NKF7 163 aa19.99■□□□□ 0.79
ITGB1-210ENST00000474568 UBE4AQ14139 1066 aa19.99■□□□□ 0.79
ITGB1-210ENST00000474568 DLK2Q6UY11 383 aa19.99■□□□□ 0.79
ITGB1-210ENST00000474568 HDAC5Q9UQL6 1122 aa19.99■□□□□ 0.79
ITGB1-210ENST00000474568 EYA2O00167 538 aa19.98■□□□□ 0.79
ITGB1-210ENST00000474568 USP48Q86UV5 1035 aa19.98■□□□□ 0.79
ITGB1-210ENST00000474568 KIAA0825Q8IV33 1275 aa19.98■□□□□ 0.79
ITGB1-210ENST00000474568 ZNF408Q9H9D4 720 aa19.98■□□□□ 0.79
ITGB1-210ENST00000474568 PDE8BO95263 885 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 RLBP1P12271 317 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 ZNF280AP59817 542 aaPredicted RBP19.97■□□□□ 0.79
ITGB1-210ENST00000474568 ITPRIPQ8IWB1 547 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 DZIP1LQ8IYY4 767 aaKnown RBP19.97■□□□□ 0.79
ITGB1-210ENST00000474568 VGLL2Q8N8G2 317 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 ZC3H15Q8WU90 426 aaKnown RBP19.97■□□□□ 0.79
ITGB1-210ENST00000474568 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 PGAP2Q9UHJ9 254 aa19.97■□□□□ 0.79
ITGB1-210ENST00000474568 IQSEC3Q9UPP2 1182 aaPredicted RBP19.97■□□□□ 0.79
ITGB1-210ENST00000474568 A0A1B0GUL6 1792 aa19.96■□□□□ 0.79
ITGB1-210ENST00000474568 F8W031 263 aaPredicted RBP19.96■□□□□ 0.79
ITGB1-210ENST00000474568 IL1R1P14778 569 aa19.96■□□□□ 0.79
ITGB1-210ENST00000474568 HIBADHP31937 336 aaKnown RBP19.96■□□□□ 0.79
ITGB1-210ENST00000474568 SCARF1Q14162 830 aa19.96■□□□□ 0.79
ITGB1-210ENST00000474568 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
ITGB1-210ENST00000474568 FAM84BQ96KN1 310 aaPredicted RBP19.96■□□□□ 0.79
ITGB1-210ENST00000474568 GGA3Q9NZ52 723 aa19.96■□□□□ 0.79
ITGB1-210ENST00000474568 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
ITGB1-210ENST00000474568 ADM5C9JUS6 153 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 SRGAP3O43295 1099 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 CELF2O95319 508 aaKnown RBP19.95■□□□□ 0.78
ITGB1-210ENST00000474568 GNAI2P04899 355 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 CDC37L1Q7L3B6 337 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 VPS37DQ86XT2 251 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 CERS5Q8N5B7 392 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 DCPSQ96C86 337 aaKnown RBP19.95■□□□□ 0.78
ITGB1-210ENST00000474568 MYO3BQ8WXR4 1341 aa19.95■□□□□ 0.78
ITGB1-210ENST00000474568 ZNF609O15014 1411 aa19.94■□□□□ 0.78
ITGB1-210ENST00000474568 ANGEL2Q5VTE6 544 aaKnown RBP19.94■□□□□ 0.78
ITGB1-210ENST00000474568 KRT26Q7Z3Y9 468 aa19.94■□□□□ 0.78
ITGB1-210ENST00000474568 OGFOD1Q8N543 542 aa19.94■□□□□ 0.78
ITGB1-210ENST00000474568 C1orf115Q9H7X2 142 aa19.94■□□□□ 0.78
ITGB1-210ENST00000474568 SCAF8Q9UPN6 1271 aaKnown RBP19.94■□□□□ 0.78
ITGB1-210ENST00000474568 SASH1O94885 1247 aa19.93■□□□□ 0.78
ITGB1-210ENST00000474568 CHAF1AQ13111 956 aaPredicted RBP19.93■□□□□ 0.78
ITGB1-210ENST00000474568 PUM3Q15397 648 aaKnown RBP19.93■□□□□ 0.78
ITGB1-210ENST00000474568 CST9Q5W186 159 aa19.93■□□□□ 0.78
ITGB1-210ENST00000474568 TDRD7Q8NHU6 1098 aaKnown RBP19.93■□□□□ 0.78
ITGB1-210ENST00000474568 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
ITGB1-210ENST00000474568 IFIT1P09914 478 aaKnown RBP19.92■□□□□ 0.78
ITGB1-210ENST00000474568 BCAMP50895 628 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms