RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MAP2K2P36507 400 aa25.83■■□□□ 1.73
PDLIM4-206ENST00000474421 GRM1Q13255 1194 aa25.83■■□□□ 1.73
PDLIM4-206ENST00000474421 IFIT5Q13325 482 aaKnown RBP25.83■■□□□ 1.73
PDLIM4-206ENST00000474421 GMLQ99445 158 aa25.83■■□□□ 1.73
PDLIM4-206ENST00000474421 ZNF804BA4D1E1 1349 aa25.83■■□□□ 1.73
PDLIM4-206ENST00000474421 SULF1Q8IWU6 871 aa25.82■■□□□ 1.72
PDLIM4-206ENST00000474421 WTIPA6NIX2 430 aaPredicted RBP25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 GRM8O00222 908 aa25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 ALDH1L1O75891 902 aa25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 KCNJ4P48050 445 aa25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 FOXO4P98177 505 aa25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 MYO3BQ8WXR4 1341 aa25.81■■□□□ 1.72
PDLIM4-206ENST00000474421 GGA3Q9NZ52 723 aa25.8■■□□□ 1.72
PDLIM4-206ENST00000474421 C9orf78Q9NZ63 289 aaPredicted RBP25.8■■□□□ 1.72
PDLIM4-206ENST00000474421 CHMP3Q9Y3E7 222 aa25.8■■□□□ 1.72
PDLIM4-206ENST00000474421 E9PSI1 815 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 MMP14P50281 582 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 CHRNDQ07001 517 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 STRIP1Q5VSL9 837 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 SLC4A10Q6U841 1118 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 SRCIN1Q9C0H9 1055 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 MYOZ2Q9NPC6 264 aa25.79■■□□□ 1.72
PDLIM4-206ENST00000474421 ADM5C9JUS6 153 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 HUNKP57058 714 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 SCARF1Q14162 830 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 DACT2Q5SW24 774 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 OGFOD1Q8N543 542 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 C2orf69Q8N8R5 385 aa25.78■■□□□ 1.72
PDLIM4-206ENST00000474421 LBX1P52954 281 aa25.77■■□□□ 1.72
PDLIM4-206ENST00000474421 CCDC57Q2TAC2 916 aa25.77■■□□□ 1.72
PDLIM4-206ENST00000474421 LMBR1LQ6UX01 489 aa25.77■■□□□ 1.72
PDLIM4-206ENST00000474421 FBXW7Q969H0 707 aa25.77■■□□□ 1.72
PDLIM4-206ENST00000474421 GBA2Q9HCG7 927 aaPredicted RBP25.77■■□□□ 1.72
PDLIM4-206ENST00000474421 HSPA8P11142 646 aaKnown RBP25.76■■□□□ 1.71
PDLIM4-206ENST00000474421 TAF7LQ5H9L4 462 aa25.76■■□□□ 1.71
PDLIM4-206ENST00000474421 TXNRD3Q86VQ6 643 aa25.76■■□□□ 1.71
PDLIM4-206ENST00000474421 PITPNM2Q9BZ72 1349 aa25.76■■□□□ 1.71
PDLIM4-206ENST00000474421 AOC2O75106 756 aa25.75■■□□□ 1.71
PDLIM4-206ENST00000474421 ANGEL2Q5VTE6 544 aaKnown RBP25.75■■□□□ 1.71
PDLIM4-206ENST00000474421 TTLL5Q6EMB2 1281 aa25.75■■□□□ 1.71
PDLIM4-206ENST00000474421 CA12O43570 354 aa25.74■■□□□ 1.71
PDLIM4-206ENST00000474421 NOGQ13253 232 aa25.74■■□□□ 1.71
PDLIM4-206ENST00000474421 DLK2Q6UY11 383 aa25.74■■□□□ 1.71
PDLIM4-206ENST00000474421 C15orf52Q6ZUT6 534 aaKnown RBP25.74■■□□□ 1.71
PDLIM4-206ENST00000474421 ZNF646O15015 1829 aaPredicted RBP25.74■■□□□ 1.71
PDLIM4-206ENST00000474421 ASTN2O75129 1339 aaPredicted RBP25.73■■□□□ 1.71
PDLIM4-206ENST00000474421 PTPRCP08575 1304 aa25.73■■□□□ 1.71
PDLIM4-206ENST00000474421 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
PDLIM4-206ENST00000474421 KLRK1P26718 216 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 EPHA10Q5JZY3 1008 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 RGMBQ6NW40 437 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 LDHAL6AQ6ZMR3 332 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 MRPL50Q8N5N7 158 aaKnown RBP25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 CDCA5Q96FF9 252 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 HDAC9Q9UKV0 1011 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 A0A1B0GUL6 1792 aa25.72■■□□□ 1.71
PDLIM4-206ENST00000474421 TAF5LO75529 589 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 CAPN15O75808 1086 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 CCDC102AQ96A19 550 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 MXD3Q9BW11 206 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 CD209Q9NNX6 404 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 CNNM1Q9NRU3 951 aa25.71■■□□□ 1.71
PDLIM4-206ENST00000474421 GTF2IP78347 998 aa25.7■■□□□ 1.7
PDLIM4-206ENST00000474421 SLFN5Q08AF3 891 aa25.7■■□□□ 1.7
PDLIM4-206ENST00000474421 HELBQ8NG08 1087 aaPredicted RBP25.7■■□□□ 1.7
PDLIM4-206ENST00000474421 UTYO14607 1347 aa25.69■■□□□ 1.7
PDLIM4-206ENST00000474421 FKBP1BP68106 108 aa25.69■■□□□ 1.7
PDLIM4-206ENST00000474421 ZNF804AQ7Z570 1209 aa25.69■■□□□ 1.7
PDLIM4-206ENST00000474421 ZNF594Q96JF6 807 aaPredicted RBP25.68■■□□□ 1.7
PDLIM4-206ENST00000474421 IRS2Q9Y4H2 1338 aa25.67■■□□□ 1.7
PDLIM4-206ENST00000474421 ZNF157P51786 506 aaPredicted RBP25.67■■□□□ 1.7
PDLIM4-206ENST00000474421 NBPF9Q3BBW0 867 aa25.67■■□□□ 1.7
PDLIM4-206ENST00000474421 SUCLG2Q96I99 432 aa25.67■■□□□ 1.7
PDLIM4-206ENST00000474421 SNAP23O00161 211 aa25.66■■□□□ 1.7
PDLIM4-206ENST00000474421 WNT10BO00744 389 aa25.66■■□□□ 1.7
PDLIM4-206ENST00000474421 NBPF7P0C2Y1 421 aaPredicted RBP25.66■■□□□ 1.7
PDLIM4-206ENST00000474421 KIAA0825Q8IV33 1275 aa25.66■■□□□ 1.7
PDLIM4-206ENST00000474421 SSH1Q8WYL5 1049 aa25.66■■□□□ 1.7
PDLIM4-206ENST00000474421 PAPPA2Q9BXP8 1791 aa25.65■■□□□ 1.7
PDLIM4-206ENST00000474421 CCER2I3L3R5 266 aa25.65■■□□□ 1.7
PDLIM4-206ENST00000474421 IL1R1P14778 569 aa25.65■■□□□ 1.7
PDLIM4-206ENST00000474421 ALDH1L2Q3SY69 923 aa25.65■■□□□ 1.7
PDLIM4-206ENST00000474421 FAM155AB1AL88 458 aaPredicted RBP25.64■■□□□ 1.7
PDLIM4-206ENST00000474421 PLIN1O60240 522 aa25.64■■□□□ 1.7
PDLIM4-206ENST00000474421 KAZALD1Q96I82 304 aa25.64■■□□□ 1.7
PDLIM4-206ENST00000474421 FKBP1AP62942 108 aaKnown RBP25.63■■□□□ 1.69
PDLIM4-206ENST00000474421 UBE4AQ14139 1066 aa25.63■■□□□ 1.69
PDLIM4-206ENST00000474421 APOBEC3FQ8IUX4 373 aaKnown RBP25.63■■□□□ 1.69
PDLIM4-206ENST00000474421 SASH1O94885 1247 aa25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 CT47B1P0C2W7 299 aaPredicted RBP25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 NF2P35240 595 aa25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 RABL6Q3YEC7 729 aaPredicted RBP25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 BICC1Q9H694 974 aaKnown RBP25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 MROH5Q6ZUA9 1318 aa25.62■■□□□ 1.69
PDLIM4-206ENST00000474421 SLC10A3P09131 477 aa25.61■■□□□ 1.69
PDLIM4-206ENST00000474421 REM2Q8IYK8 340 aaPredicted RBP25.61■■□□□ 1.69
PDLIM4-206ENST00000474421 DLGAP5Q15398 846 aa25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 TRMT2AQ8IZ69 625 aaKnown RBP25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 CDCA7LQ96GN5 454 aa25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 ZBED3Q96IU2 234 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms