RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 USP17L1Q7RTZ2 530 aa23.1■■□□□ 1.29
PDE6B-208ENST00000474251 C2orf69Q8N8R5 385 aa23.1■■□□□ 1.29
PDE6B-208ENST00000474251 MRS2Q9HD23 443 aa23.1■■□□□ 1.29
PDE6B-208ENST00000474251 CCT4P50991 539 aaKnown RBP23.09■■□□□ 1.29
PDE6B-208ENST00000474251 CASP7P55210 303 aa23.09■■□□□ 1.29
PDE6B-208ENST00000474251 CDCA5Q96FF9 252 aa23.09■■□□□ 1.29
PDE6B-208ENST00000474251 USP17L8P0C7I0 530 aa23.08■■□□□ 1.29
PDE6B-208ENST00000474251 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
PDE6B-208ENST00000474251 SCARF1Q14162 830 aa23.08■■□□□ 1.29
PDE6B-208ENST00000474251 ANGEL2Q5VTE6 544 aaKnown RBP23.08■■□□□ 1.29
PDE6B-208ENST00000474251 DNAAF4Q8WXU2 420 aa23.08■■□□□ 1.29
PDE6B-208ENST00000474251 MYOZ2Q9NPC6 264 aa23.08■■□□□ 1.29
PDE6B-208ENST00000474251 PITPNM2Q9BZ72 1349 aa23.08■■□□□ 1.28
PDE6B-208ENST00000474251 IGHMBP2P38935 993 aaKnown RBP23.07■■□□□ 1.28
PDE6B-208ENST00000474251 FAM161AQ3B820 660 aa23.07■■□□□ 1.28
PDE6B-208ENST00000474251 ITGA6P23229 1130 aa23.06■■□□□ 1.28
PDE6B-208ENST00000474251 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
PDE6B-208ENST00000474251 VAMP4O75379 141 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 TXNRD3Q86VQ6 643 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 CCDC102AQ96A19 550 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 LEMD3Q9Y2U8 911 aa23.05■■□□□ 1.28
PDE6B-208ENST00000474251 CSF1RP07333 972 aa23.04■■□□□ 1.28
PDE6B-208ENST00000474251 SLC10A3P09131 477 aa23.04■■□□□ 1.28
PDE6B-208ENST00000474251 ZNF157P51786 506 aaPredicted RBP23.04■■□□□ 1.28
PDE6B-208ENST00000474251 MXD3Q9BW11 206 aa23.04■■□□□ 1.28
PDE6B-208ENST00000474251 COA1Q9GZY4 146 aa23.04■■□□□ 1.28
PDE6B-208ENST00000474251 KLRK1P26718 216 aa23.03■■□□□ 1.28
PDE6B-208ENST00000474251 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
PDE6B-208ENST00000474251 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
PDE6B-208ENST00000474251 MYO3BQ8WXR4 1341 aa23.03■■□□□ 1.28
PDE6B-208ENST00000474251 ARAP2Q8WZ64 1704 aa23.02■■□□□ 1.28
PDE6B-208ENST00000474251 ANP32CO43423 234 aa23.02■■□□□ 1.28
PDE6B-208ENST00000474251 KIF23Q02241 960 aaPredicted RBP23.02■■□□□ 1.28
PDE6B-208ENST00000474251 EXOSC9Q06265 439 aaKnown RBP23.02■■□□□ 1.28
PDE6B-208ENST00000474251 STRIP1Q5VSL9 837 aa23.02■■□□□ 1.28
PDE6B-208ENST00000474251 MPHOSPH8Q99549 860 aa23.02■■□□□ 1.28
PDE6B-208ENST00000474251 LAMB1P07942 1786 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 NBPF9Q3BBW0 867 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 FBXW7Q969H0 707 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 MCOLN1Q9GZU1 580 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 ANKRD2Q9GZV1 360 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 SAGE1Q9NXZ1 904 aa23.01■■□□□ 1.27
PDE6B-208ENST00000474251 SCAF8Q9UPN6 1271 aaKnown RBP23.01■■□□□ 1.27
PDE6B-208ENST00000474251 FKBP1BP68106 108 aa23■■□□□ 1.27
PDE6B-208ENST00000474251 RASAL3Q86YV0 1011 aa23■■□□□ 1.27
PDE6B-208ENST00000474251 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
PDE6B-208ENST00000474251 WNT10BO00744 389 aa22.99■■□□□ 1.27
PDE6B-208ENST00000474251 CHRNDQ07001 517 aa22.99■■□□□ 1.27
PDE6B-208ENST00000474251 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 CCDC85CA6NKD9 419 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 F6X3S4 739 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 BEND3Q5T5X7 828 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 OGFOD1Q8N543 542 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 IRS2Q9Y4H2 1338 aa22.98■■□□□ 1.27
PDE6B-208ENST00000474251 FOXO4P98177 505 aa22.97■■□□□ 1.27
PDE6B-208ENST00000474251 TTLL5Q6EMB2 1281 aa22.97■■□□□ 1.27
PDE6B-208ENST00000474251 KCNJ4P48050 445 aa22.96■■□□□ 1.27
PDE6B-208ENST00000474251 DGKZQ13574 1117 aa22.96■■□□□ 1.27
PDE6B-208ENST00000474251 MOB2Q70IA6 237 aa22.96■■□□□ 1.27
PDE6B-208ENST00000474251 CSRNP1Q96S65 589 aa22.96■■□□□ 1.27
PDE6B-208ENST00000474251 RNF186Q9NXI6 227 aa22.96■■□□□ 1.27
PDE6B-208ENST00000474251 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
PDE6B-208ENST00000474251 SASH1O94885 1247 aa22.95■■□□□ 1.26
PDE6B-208ENST00000474251 MMP14P50281 582 aa22.95■■□□□ 1.26
PDE6B-208ENST00000474251 PRAMEF18Q5VWM3 479 aa22.95■■□□□ 1.26
PDE6B-208ENST00000474251 SNAP23O00161 211 aa22.94■■□□□ 1.26
PDE6B-208ENST00000474251 TRPA1O75762 1119 aa22.94■■□□□ 1.26
PDE6B-208ENST00000474251 GTF2IP78347 998 aa22.94■■□□□ 1.26
PDE6B-208ENST00000474251 IFIT5Q13325 482 aaKnown RBP22.94■■□□□ 1.26
PDE6B-208ENST00000474251 C15orf52Q6ZUT6 534 aaKnown RBP22.94■■□□□ 1.26
PDE6B-208ENST00000474251 KIAA0825Q8IV33 1275 aa22.94■■□□□ 1.26
PDE6B-208ENST00000474251 CD209Q9NNX6 404 aa22.94■■□□□ 1.26
PDE6B-208ENST00000474251 COL1A1P02452 1464 aaPredicted RBP22.93■■□□□ 1.26
PDE6B-208ENST00000474251 OTOFQ9HC10 1997 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 MYH13Q9UKX3 1938 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 TAF5LO75529 589 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 EPHA10Q5JZY3 1008 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 ZBED3Q96IU2 234 aaPredicted RBP22.93■■□□□ 1.26
PDE6B-208ENST00000474251 HDAC9Q9UKV0 1011 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 CHMP3Q9Y3E7 222 aa22.93■■□□□ 1.26
PDE6B-208ENST00000474251 REM2Q8IYK8 340 aaPredicted RBP22.92■■□□□ 1.26
PDE6B-208ENST00000474251 HELBQ8NG08 1087 aaPredicted RBP22.92■■□□□ 1.26
PDE6B-208ENST00000474251 PDE4DIPQ5VU43 2346 aa22.91■■□□□ 1.26
PDE6B-208ENST00000474251 UBE2Q2LH0YL09 131 aa22.91■■□□□ 1.26
PDE6B-208ENST00000474251 GRM8O00222 908 aa22.91■■□□□ 1.26
PDE6B-208ENST00000474251 RGS19P49795 217 aa22.91■■□□□ 1.26
PDE6B-208ENST00000474251 LMBR1LQ6UX01 489 aa22.9■■□□□ 1.26
PDE6B-208ENST00000474251 APOBEC3FQ8IUX4 373 aaKnown RBP22.9■■□□□ 1.26
PDE6B-208ENST00000474251 CERS5Q8N5B7 392 aa22.9■■□□□ 1.26
PDE6B-208ENST00000474251 IL1R1P14778 569 aa22.89■■□□□ 1.25
PDE6B-208ENST00000474251 NF2P35240 595 aa22.89■■□□□ 1.25
PDE6B-208ENST00000474251 TTLL12Q14166 644 aaPredicted RBP22.89■■□□□ 1.25
PDE6B-208ENST00000474251 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
PDE6B-208ENST00000474251 ZNF594Q96JF6 807 aaPredicted RBP22.89■■□□□ 1.25
PDE6B-208ENST00000474251 ZNF804AQ7Z570 1209 aa22.88■■□□□ 1.25
PDE6B-208ENST00000474251 ZNF521Q96K83 1311 aa22.87■■□□□ 1.25
PDE6B-208ENST00000474251 ALDH1L1O75891 902 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms