RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 USP17L8P0C7I0 530 aa23.37■■□□□ 1.33
CCDC171-206ENST00000474193 STRIP1Q5VSL9 837 aa23.37■■□□□ 1.33
CCDC171-206ENST00000474193 HELBQ8NG08 1087 aaPredicted RBP23.37■■□□□ 1.33
CCDC171-206ENST00000474193 ZNF594Q96JF6 807 aaPredicted RBP23.37■■□□□ 1.33
CCDC171-206ENST00000474193 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
CCDC171-206ENST00000474193 WTIPA6NIX2 430 aaPredicted RBP23.36■■□□□ 1.33
CCDC171-206ENST00000474193 TAF5LO75529 589 aa23.36■■□□□ 1.33
CCDC171-206ENST00000474193 MMP14P50281 582 aa23.36■■□□□ 1.33
CCDC171-206ENST00000474193 KIF4BQ2VIQ3 1234 aa23.36■■□□□ 1.33
CCDC171-206ENST00000474193 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
CCDC171-206ENST00000474193 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
CCDC171-206ENST00000474193 GLIS2Q9BZE0 524 aaPredicted RBP23.36■■□□□ 1.33
CCDC171-206ENST00000474193 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
CCDC171-206ENST00000474193 TRAF5O00463 557 aa23.35■■□□□ 1.33
CCDC171-206ENST00000474193 BRPF1P55201 1214 aaPredicted RBP23.35■■□□□ 1.33
CCDC171-206ENST00000474193 PAXIP1Q6ZW49 1069 aaPredicted RBP23.35■■□□□ 1.33
CCDC171-206ENST00000474193 BICC1Q9H694 974 aaKnown RBP23.35■■□□□ 1.33
CCDC171-206ENST00000474193 RASSF10A6NK89 507 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 IPO8O15397 1037 aaKnown RBP23.34■■□□□ 1.33
CCDC171-206ENST00000474193 CELF2O95319 508 aaKnown RBP23.34■■□□□ 1.33
CCDC171-206ENST00000474193 KRT26Q7Z3Y9 468 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 USP48Q86UV5 1035 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 TXNRD3Q86VQ6 643 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 ZNF408Q9H9D4 720 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 HDAC9Q9UKV0 1011 aa23.34■■□□□ 1.33
CCDC171-206ENST00000474193 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
CCDC171-206ENST00000474193 SCN9AQ15858 1988 aa23.33■■□□□ 1.33
CCDC171-206ENST00000474193 ECE1P42892 770 aa23.33■■□□□ 1.33
CCDC171-206ENST00000474193 ZNF280AP59817 542 aaPredicted RBP23.33■■□□□ 1.33
CCDC171-206ENST00000474193 C15orf52Q6ZUT6 534 aaKnown RBP23.33■■□□□ 1.33
CCDC171-206ENST00000474193 SULF1Q8IWU6 871 aa23.33■■□□□ 1.33
CCDC171-206ENST00000474193 USP44Q9H0E7 712 aa23.33■■□□□ 1.33
CCDC171-206ENST00000474193 VEGFBP49765 207 aa23.32■■□□□ 1.32
CCDC171-206ENST00000474193 RARSP54136 660 aaKnown RBP23.32■■□□□ 1.32
CCDC171-206ENST00000474193 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
CCDC171-206ENST00000474193 CD209Q9NNX6 404 aa23.32■■□□□ 1.32
CCDC171-206ENST00000474193 MYOZ2Q9NPC6 264 aa23.32■■□□□ 1.32
CCDC171-206ENST00000474193 ZNF609O15014 1411 aa23.32■■□□□ 1.32
CCDC171-206ENST00000474193 MROH5Q6ZUA9 1318 aa23.32■■□□□ 1.32
CCDC171-206ENST00000474193 TRPM7Q96QT4 1865 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 UBTFL1P0CB47 393 aaPredicted RBP23.31■■□□□ 1.32
CCDC171-206ENST00000474193 GTF2IP78347 998 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 FMR1Q06787 632 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC171-206ENST00000474193 UBE4AQ14139 1066 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 DACT2Q5SW24 774 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 CST9Q5W186 159 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 KAZALD1Q96I82 304 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 GMLQ99445 158 aa23.31■■□□□ 1.32
CCDC171-206ENST00000474193 SCARF1Q14162 830 aa23.3■■□□□ 1.32
CCDC171-206ENST00000474193 EGFRP00533 1210 aa23.29■■□□□ 1.32
CCDC171-206ENST00000474193 HSPA1AP0DMV8 641 aaKnown RBP23.29■■□□□ 1.32
CCDC171-206ENST00000474193 HSPA1BP0DMV9 641 aaKnown RBP23.29■■□□□ 1.32
CCDC171-206ENST00000474193 KLRK1P26718 216 aa23.29■■□□□ 1.32
CCDC171-206ENST00000474193 AIDAQ96BJ3 306 aa23.29■■□□□ 1.32
CCDC171-206ENST00000474193 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
CCDC171-206ENST00000474193 TLL2Q9Y6L7 1015 aa23.29■■□□□ 1.32
CCDC171-206ENST00000474193 SNAP23O00161 211 aa23.28■■□□□ 1.32
CCDC171-206ENST00000474193 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
CCDC171-206ENST00000474193 C2orf69Q8N8R5 385 aa23.28■■□□□ 1.32
CCDC171-206ENST00000474193 PSME4Q14997 1843 aa23.28■■□□□ 1.32
CCDC171-206ENST00000474193 WDR33Q9C0J8 1336 aaKnown RBP23.28■■□□□ 1.32
CCDC171-206ENST00000474193 GRM1Q13255 1194 aa23.27■■□□□ 1.32
CCDC171-206ENST00000474193 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
CCDC171-206ENST00000474193 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
CCDC171-206ENST00000474193 PUS3Q9BZE2 481 aaKnown RBP23.27■■□□□ 1.32
CCDC171-206ENST00000474193 RIPOR2Q9Y4F9 1068 aa23.27■■□□□ 1.32
CCDC171-206ENST00000474193 IL1R1P14778 569 aa23.26■■□□□ 1.31
CCDC171-206ENST00000474193 ANGEL2Q5VTE6 544 aaKnown RBP23.26■■□□□ 1.31
CCDC171-206ENST00000474193 CAPNS2Q96L46 248 aa23.26■■□□□ 1.31
CCDC171-206ENST00000474193 RCAN3Q9UKA8 241 aa23.26■■□□□ 1.31
CCDC171-206ENST00000474193 HIBADHP31937 336 aaKnown RBP23.25■■□□□ 1.31
CCDC171-206ENST00000474193 MAP2K1Q02750 393 aaPredicted RBP23.25■■□□□ 1.31
CCDC171-206ENST00000474193 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 SAPCD2Q86UD0 394 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 KIAA0825Q8IV33 1275 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
CCDC171-206ENST00000474193 HHIPL1Q96JK4 782 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 MXD3Q9BW11 206 aa23.25■■□□□ 1.31
CCDC171-206ENST00000474193 POLR2AP24928 1970 aaKnown RBP23.25■■□□□ 1.31
CCDC171-206ENST00000474193 BCAR3O75815 825 aa23.24■■□□□ 1.31
CCDC171-206ENST00000474193 PITPNM2Q9BZ72 1349 aa23.24■■□□□ 1.31
CCDC171-206ENST00000474193 ADM5C9JUS6 153 aa23.23■■□□□ 1.31
CCDC171-206ENST00000474193 FRAT2O75474 233 aaPredicted RBP23.23■■□□□ 1.31
CCDC171-206ENST00000474193 SASH1O94885 1247 aa23.23■■□□□ 1.31
CCDC171-206ENST00000474193 GNAI3P08754 354 aa23.23■■□□□ 1.31
CCDC171-206ENST00000474193 FKBP1AP62942 108 aaKnown RBP23.23■■□□□ 1.31
CCDC171-206ENST00000474193 GBA2Q9HCG7 927 aaPredicted RBP23.23■■□□□ 1.31
CCDC171-206ENST00000474193 PDE8BO95263 885 aa23.22■■□□□ 1.31
CCDC171-206ENST00000474193 HUNKP57058 714 aa23.22■■□□□ 1.31
CCDC171-206ENST00000474193 LRRC24Q50LG9 513 aa23.22■■□□□ 1.31
CCDC171-206ENST00000474193 CYP4F22Q6NT55 531 aa23.22■■□□□ 1.31
CCDC171-206ENST00000474193 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
CCDC171-206ENST00000474193 MAP2K2P36507 400 aa23.21■■□□□ 1.31
CCDC171-206ENST00000474193 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
CCDC171-206ENST00000474193 INTS3Q68E01 1043 aaKnown RBP23.21■■□□□ 1.31
CCDC171-206ENST00000474193 FBXO3Q9UK99 471 aa23.21■■□□□ 1.31
CCDC171-206ENST00000474193 IRS2Q9Y4H2 1338 aa23.21■■□□□ 1.31
CCDC171-206ENST00000474193 EYA2O00167 538 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms