RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 RUFY2Q8WXA3 655 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 TGFB2P61812 414 aa12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 SP8Q8IXZ3 490 aa12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 EYA3Q99504 573 aa12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
PRPF38A-202ENST00000474048 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
PRPF38A-202ENST00000474048 LRRC37AA6NMS7 1700 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 FGFR2P21802 821 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 CHRNA5P30532 468 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 ADORA1P30542 326 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 SOGA3Q5TF21 947 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 MPNDQ8N594 471 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■□□□ 14.5
PRPF38A-202ENST00000474048 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
PRPF38A-202ENST00000474048 GOLIM4O00461 696 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 HAUS7Q99871 368 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.44□□□□□ -0.42
PRPF38A-202ENST00000474048 COL4A1P02462 1669 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 SEMA3EO15041 775 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 REC8O95072 547 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 ARID4AP29374 1257 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 HIBADHP31937 336 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 PHKA1P46020 1223 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 GPSM2P81274 684 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 BACH2Q9BYV9 841 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
PRPF38A-202ENST00000474048 DPEP1P16444 411 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 GYG1P46976 350 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 RFX7Q2KHR2 1363 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
PRPF38A-202ENST00000474048 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 BCAMP50895 628 aa12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
PRPF38A-202ENST00000474048 DUOX1Q9NRD9 1551 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 SNAP23O00161 211 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 MCCP23508 829 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 ZAP70P43403 619 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 LRP2BPQ9P2M1 347 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 MYH7P12883 1935 aa12.4□□□□□ -0.42
PRPF38A-202ENST00000474048 RAD50Q92878 1312 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 C21orf2O43822 256 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 MCAMP43121 646 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 RASGRF1Q13972 1273 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 SPTY2D1Q68D10 685 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 IQSEC3Q9UPP2 1182 aaPredicted RBP12.39□□□□□ -0.43
PRPF38A-202ENST00000474048 CHMLP26374 656 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 C15orf52Q6ZUT6 534 aaKnown RBP12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
PRPF38A-202ENST00000474048 COA1Q9GZY4 146 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms