RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 TNS4Q8IZW8 715 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 SIX5Q8N196 739 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 TMEM151AQ8N4L1 468 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 ZDHHC1Q8WTX9 485 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 KLRG1Q96E93 195 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 MYH16Q9H6N6 1097 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 ARHGEF40Q8TER5 1519 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 PLEKHH1Q9ULM0 1364 aa7.56□□□□□ -1.2
ATPAF1-204ENST00000474020 ZNF521Q96K83 1311 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 A0A1W2PNR3 127 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 OIP5O43482 229 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 TNNT2P45379 298 aaPredicted RBP7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 SAFB2Q14151 953 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 CENPQQ7L2Z9 268 aaPredicted RBP7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 WDR63Q8IWG1 891 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 PRAM1Q96QH2 718 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 TULP4Q9NRJ4 1543 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 ABCC11Q96J66 1382 aa7.55□□□□□ -1.2
ATPAF1-204ENST00000474020 RIMS2Q9UQ26 1411 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 DLC1Q96QB1 1528 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 TSPOAP1O95153 1857 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 C2CD2LO14523 706 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 ATXN7O15265 892 aaPredicted RBP7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 DKK1O94907 266 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 GDF11O95390 407 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 U2AF1L5P0DN76 240 aaPredicted RBP7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 BMP4P12644 408 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 NOS2P35228 1153 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 TXLNAP40222 546 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 MTHFSP49914 203 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 U2AF1Q01081 240 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 PPP1R12CQ9BZL4 782 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 MED14O60244 1454 aa7.54□□□□□ -1.2
ATPAF1-204ENST00000474020 ALKQ9UM73 1620 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 PHF20L1A8MW92 1017 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 EML1O00423 815 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 CT47B1P0C2W7 299 aaPredicted RBP7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 CTBSQ01459 385 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 PDE3AQ14432 1141 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 BICDL1Q6ZP65 573 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 PTPRMP28827 1452 aa7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 CLTCQ00610 1675 aaKnown RBP7.53□□□□□ -1.2
ATPAF1-204ENST00000474020 A2ML1A8K2U0 1454 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 ATP7BP35670 1465 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 A0A1W2PP64 1363 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 SERTM1A2A2V5 107 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 PLIN1O60240 522 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 FAM157BP0CG42 384 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 MAPTP10636 758 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 RASA1P20936 1047 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 IRS1P35568 1242 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 TNP2Q05952 138 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 MLECQ14165 292 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 POTEAQ6S8J7 498 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 TRMT2AQ8IZ69 625 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 BEND7Q8N7W2 519 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 CDK19Q9BWU1 502 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 ZNF232Q9UNY5 417 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 GPC6Q9Y625 555 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 GJA3Q9Y6H8 435 aa7.52□□□□□ -1.21
ATPAF1-204ENST00000474020 TNRQ92752 1358 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 DCDC2BA2VCK2 349 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 KHNYNO15037 678 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 U2SURPO15042 1029 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 CALD1Q05682 793 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 FAM182BQ5T319 152 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 TCP11L2Q8N4U5 519 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 KCTD17Q8N5Z5 321 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 NOP58Q9Y2X3 529 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 CHMP3Q9Y3E7 222 aa7.51□□□□□ -1.21
ATPAF1-204ENST00000474020 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 ARAFP10398 606 aa7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 C1orf229Q6ZS94 237 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 IPO9Q96P70 1041 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-204ENST00000474020 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms