RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 ARMC9Q7Z3E5 817 aa21.18■□□□□ 0.98
HPS4-210ENST00000473782 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
HPS4-210ENST00000473782 XDHP47989 1333 aa21.18■□□□□ 0.98
HPS4-210ENST00000473782 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
HPS4-210ENST00000473782 CEP290O15078 2479 aa21.18■□□□□ 0.98
HPS4-210ENST00000473782 NF2P35240 595 aa21.17■□□□□ 0.98
HPS4-210ENST00000473782 CD99L2Q8TCZ2 262 aa21.17■□□□□ 0.98
HPS4-210ENST00000473782 OTUD5Q96G74 571 aa21.17■□□□□ 0.98
HPS4-210ENST00000473782 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
HPS4-210ENST00000473782 MANSC4A6NHS7 340 aaPredicted RBP21.16■□□□□ 0.98
HPS4-210ENST00000473782 ATP2B4P23634 1241 aa21.16■□□□□ 0.98
HPS4-210ENST00000473782 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
HPS4-210ENST00000473782 INHBEP58166 350 aa21.16■□□□□ 0.98
HPS4-210ENST00000473782 MAP3K11Q16584 847 aa21.16■□□□□ 0.98
HPS4-210ENST00000473782 CLMNQ96JQ2 1002 aa21.16■□□□□ 0.98
HPS4-210ENST00000473782 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
HPS4-210ENST00000473782 SSC5DA1L4H1 1573 aa21.15■□□□□ 0.98
HPS4-210ENST00000473782 HDGFL1Q5TGJ6 251 aa21.15■□□□□ 0.98
HPS4-210ENST00000473782 TXNRD3Q86VQ6 643 aa21.15■□□□□ 0.98
HPS4-210ENST00000473782 JARID2Q92833 1246 aaPredicted RBP21.15■□□□□ 0.98
HPS4-210ENST00000473782 GJA5P36382 358 aa21.14■□□□□ 0.97
HPS4-210ENST00000473782 WNK4Q96J92 1243 aa21.14■□□□□ 0.97
HPS4-210ENST00000473782 ZNF333Q96JL9 665 aa21.14■□□□□ 0.97
HPS4-210ENST00000473782 PTPN18Q99952 460 aa21.14■□□□□ 0.97
HPS4-210ENST00000473782 DBF4Q9UBU7 674 aaPredicted RBP21.14■□□□□ 0.97
HPS4-210ENST00000473782 LAMB1P07942 1786 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 MED23Q9ULK4 1368 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 CRHR2Q13324 411 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 CCDC152Q4G0S7 254 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 STRIP1Q5VSL9 837 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 OGFOD1Q8N543 542 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 SLC10A4Q96EP9 437 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
HPS4-210ENST00000473782 A0A0C4DFX4 3053 aa21.13■□□□□ 0.97
HPS4-210ENST00000473782 PDE8AO60658 829 aa21.12■□□□□ 0.97
HPS4-210ENST00000473782 PCCAP05165 728 aaPredicted RBP21.12■□□□□ 0.97
HPS4-210ENST00000473782 ZBTB48P10074 688 aaPredicted RBP21.12■□□□□ 0.97
HPS4-210ENST00000473782 EFCC1Q9HA90 598 aa21.12■□□□□ 0.97
HPS4-210ENST00000473782 MINPP1Q9UNW1 487 aa21.12■□□□□ 0.97
HPS4-210ENST00000473782 HOXB7P09629 217 aa21.11■□□□□ 0.97
HPS4-210ENST00000473782 APOBEC3FQ8IUX4 373 aaKnown RBP21.11■□□□□ 0.97
HPS4-210ENST00000473782 ANKRD18AQ8IVF6 992 aa21.11■□□□□ 0.97
HPS4-210ENST00000473782 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
HPS4-210ENST00000473782 MYO3BQ8WXR4 1341 aa21.1■□□□□ 0.97
HPS4-210ENST00000473782 H0YGN5 161 aa21.1■□□□□ 0.97
HPS4-210ENST00000473782 DEFB129Q9H1M3 183 aa21.1■□□□□ 0.97
HPS4-210ENST00000473782 TRIM35Q9UPQ4 493 aa21.1■□□□□ 0.97
HPS4-210ENST00000473782 COL6A3P12111 3177 aa21.09■□□□□ 0.97
HPS4-210ENST00000473782 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
HPS4-210ENST00000473782 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
HPS4-210ENST00000473782 PCDHAC2Q9Y5I4 1007 aa21.09■□□□□ 0.97
HPS4-210ENST00000473782 KLRK1P26718 216 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 MMP14P50281 582 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 SP3Q02447 781 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 KIAA0825Q8IV33 1275 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 CCDC191Q8NCU4 936 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 MYD88Q99836 296 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 COA1Q9GZY4 146 aa21.08■□□□□ 0.97
HPS4-210ENST00000473782 BSDC1Q9NW68 430 aaPredicted RBP21.08■□□□□ 0.97
HPS4-210ENST00000473782 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
HPS4-210ENST00000473782 LMOD3Q0VAK6 560 aa21.07■□□□□ 0.96
HPS4-210ENST00000473782 TTLL5Q6EMB2 1281 aa21.07■□□□□ 0.96
HPS4-210ENST00000473782 RIC3Q7Z5B4 369 aa21.07■□□□□ 0.96
HPS4-210ENST00000473782 FBXW7Q969H0 707 aa21.07■□□□□ 0.96
HPS4-210ENST00000473782 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.07■□□□□ 0.96
HPS4-210ENST00000473782 COL1A1P02452 1464 aaPredicted RBP21.07■□□□□ 0.96
HPS4-210ENST00000473782 AOX1Q06278 1338 aa21.06■□□□□ 0.96
HPS4-210ENST00000473782 DUSP27Q5VZP5 1158 aa21.06■□□□□ 0.96
HPS4-210ENST00000473782 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
HPS4-210ENST00000473782 PTCH2Q9Y6C5 1203 aa21.06■□□□□ 0.96
HPS4-210ENST00000473782 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
HPS4-210ENST00000473782 TTLL11Q8NHH1 800 aa21.05■□□□□ 0.96
HPS4-210ENST00000473782 TMEM106CQ9BVX2 250 aa21.05■□□□□ 0.96
HPS4-210ENST00000473782 UNCXA6NJT0 531 aa21.04■□□□□ 0.96
HPS4-210ENST00000473782 USP2O75604 605 aaPredicted RBP21.04■□□□□ 0.96
HPS4-210ENST00000473782 CERS5Q8N5B7 392 aa21.04■□□□□ 0.96
HPS4-210ENST00000473782 MS4A4AQ96JQ5 239 aa21.04■□□□□ 0.96
HPS4-210ENST00000473782 GREM2Q9H772 168 aa21.04■□□□□ 0.96
HPS4-210ENST00000473782 LAMA3Q16787 3333 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 DLL1O00548 723 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 CTSWP56202 376 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 NEUROD2Q15784 382 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 NBPF12Q5TAG4 269 aaPredicted RBP21.03■□□□□ 0.96
HPS4-210ENST00000473782 CHRDL2Q6WN34 429 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 MTMR14Q8NCE2 650 aa21.03■□□□□ 0.96
HPS4-210ENST00000473782 CWC25Q9NXE8 425 aaPredicted RBP21.03■□□□□ 0.96
HPS4-210ENST00000473782 RBM27Q9P2N5 1060 aaKnown RBP21.03■□□□□ 0.96
HPS4-210ENST00000473782 PPP1R12BO60237 982 aaPredicted RBP21.02■□□□□ 0.96
HPS4-210ENST00000473782 GTF2IP78347 998 aa21.02■□□□□ 0.96
HPS4-210ENST00000473782 CDC5LQ99459 802 aaKnown RBP21.02■□□□□ 0.96
HPS4-210ENST00000473782 PRO3102Q9H379 93 aa21.02■□□□□ 0.96
HPS4-210ENST00000473782 ZNF804BA4D1E1 1349 aa21.02■□□□□ 0.95
HPS4-210ENST00000473782 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
HPS4-210ENST00000473782 METTL22Q9BUU2 404 aaPredicted RBP21.01■□□□□ 0.95
HPS4-210ENST00000473782 LEMD3Q9Y2U8 911 aa21.01■□□□□ 0.95
HPS4-210ENST00000473782 PPP2R3BQ9Y5P8 575 aa21.01■□□□□ 0.95
HPS4-210ENST00000473782 IRS2Q9Y4H2 1338 aa21.01■□□□□ 0.95
HPS4-210ENST00000473782 SLC9C1Q4G0N8 1177 aa21■□□□□ 0.95
HPS4-210ENST00000473782 OTUD7BQ6GQQ9 843 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms