RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RNF113AO15541 343 aaKnown RBP7.48□□□□□ -1.21
CLK1-210ENST00000473565 FGFR2P21802 821 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 ZMYM1Q5SVZ6 1142 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 TTC14Q96N46 770 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 MROH5Q6ZUA9 1318 aa7.48□□□□□ -1.21
CLK1-210ENST00000473565 IDH1O75874 414 aaKnown RBP7.47□□□□□ -1.21
CLK1-210ENST00000473565 TTLL5Q6EMB2 1281 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 RUFY3Q7L099 469 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 LPIN2Q92539 896 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 KLRK1P26718 216 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 RASGRF1Q13972 1273 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 PUS7LQ9H0K6 701 aaKnown RBP7.47□□□□□ -1.21
CLK1-210ENST00000473565 HMG20BQ9P0W2 317 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
CLK1-210ENST00000473565 UBR3Q6ZT12 1888 aa7.47□□□□□ -1.21
CLK1-210ENST00000473565 EPB41L2O43491 1005 aaKnown RBP7.46□□□□□ -1.21
CLK1-210ENST00000473565 CYP21A2P08686 494 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 SLC5A1P13866 664 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 ZKSCAN1P17029 563 aaPredicted RBP7.46□□□□□ -1.21
CLK1-210ENST00000473565 GYG1P46976 350 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 RBM6P78332 1123 aaKnown RBP7.46□□□□□ -1.21
CLK1-210ENST00000473565 TXNRD1Q16881 649 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 IL17RAQ96F46 866 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.21
CLK1-210ENST00000473565 LRRC2Q9BYS8 371 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 PDRG1Q9NUG6 133 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 WWC3Q9ULE0 1092 aa7.46□□□□□ -1.21
CLK1-210ENST00000473565 RAB3GAP1Q15042 981 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 SF3B3Q15393 1217 aaKnown RBP7.46□□□□□ -1.22
CLK1-210ENST00000473565 COL24A1Q17RW2 1714 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 TPTE2Q6XPS3 522 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 STOX1Q6ZVD7 989 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLK1-210ENST00000473565 KCNB2Q92953 911 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 RFX7Q2KHR2 1363 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 RTL9Q8NET4 1388 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 HSPD1P10809 573 aaKnown RBP7.46□□□□□ -1.22
CLK1-210ENST00000473565 MCM4P33991 863 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 HAND2P61296 217 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 ZNF827Q17R98 1081 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 SLC9C2Q5TAH2 1124 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 NECAB1Q8N987 351 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 ZSWIM6Q9HCJ5 1215 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 MINPP1Q9UNW1 487 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 MYH7P12883 1935 aa7.46□□□□□ -1.22
CLK1-210ENST00000473565 RPAP1Q9BWH6 1393 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 FOXP2O15409 715 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 APBA3O96018 575 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 GYS1P13807 737 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 SLC10A5Q5PT55 438 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 HELLSQ9NRZ9 838 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 ARID4AP29374 1257 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 FOXD4L6Q3SYB3 417 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 ZNF772Q68DY9 489 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 FOXD4L3Q6VB84 417 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 CNBD1Q8NA66 436 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 CIZ1Q9ULV3 898 aaPredicted RBP7.45□□□□□ -1.22
CLK1-210ENST00000473565 JAG2Q9Y219 1238 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 A0A1B0GUL6 1792 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 ARAP2Q8WZ64 1704 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 CARMIL3Q8ND23 1372 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 ZNF532Q9HCE3 1301 aa7.45□□□□□ -1.22
CLK1-210ENST00000473565 TM4SF1P30408 202 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 CUL4AQ13619 759 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 PRR5LQ6MZQ0 368 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 CHST3Q7LGC8 479 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 GPR101Q96P66 508 aaPredicted RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 TFCP2L1Q9NZI6 479 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 GPAA1O43292 621 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 PDE6AP16499 860 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 MCM2P49736 904 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 DDR1Q08345 913 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 ST3GAL1Q11201 340 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 ME3Q16798 604 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 BLOC1S2Q6QNY1 142 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 BSDC1Q9NW68 430 aaPredicted RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 RGS17Q9UGC6 210 aaPredicted RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 TPCN1Q9ULQ1 816 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 LIMCH1Q9UPQ0 1083 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 U3KPZ7 1027 aaPredicted RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 RPS6KB1P23443 525 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 ADD2P35612 726 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 DEKP35659 375 aaKnown RBP7.44□□□□□ -1.22
CLK1-210ENST00000473565 STK3Q13188 491 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 MAGEB6Q8N7X4 407 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 APPBP2Q92624 585 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 TM6SF1Q9BZW5 370 aa7.44□□□□□ -1.22
CLK1-210ENST00000473565 COL1A1P02452 1464 aaPredicted RBP7.43□□□□□ -1.22
CLK1-210ENST00000473565 LAMA4Q16363 1823 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms