RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SASH1O94885 1247 aa16.35■□□□□ 0.21
TRAF4-209ENST00000473421 ATP2B4P23634 1241 aa16.35■□□□□ 0.21
TRAF4-209ENST00000473421 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
TRAF4-209ENST00000473421 TTLL11Q8NHH1 800 aa16.35■□□□□ 0.21
TRAF4-209ENST00000473421 PITPNM2Q9BZ72 1349 aa16.35■□□□□ 0.21
TRAF4-209ENST00000473421 APAF1O14727 1248 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 FKBP1BP68106 108 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 PRKG1Q13976 671 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRAF4-209ENST00000473421 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 PCDH10Q9P2E7 1040 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
TRAF4-209ENST00000473421 TM4SF4P48230 202 aa16.33■□□□□ 0.2
TRAF4-209ENST00000473421 CTSWP56202 376 aa16.33■□□□□ 0.2
TRAF4-209ENST00000473421 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
TRAF4-209ENST00000473421 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.2
TRAF4-209ENST00000473421 GPR25O00155 361 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 SNAP23O00161 211 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 CENPFP49454 3210 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
TRAF4-209ENST00000473421 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-209ENST00000473421 G2E3Q7L622 706 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 FBXW7Q969H0 707 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
TRAF4-209ENST00000473421 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
TRAF4-209ENST00000473421 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
TRAF4-209ENST00000473421 PRPF38BQ5VTL8 546 aaKnown RBP16.31■□□□□ 0.2
TRAF4-209ENST00000473421 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-209ENST00000473421 PI4KAP1Q8N8J0 262 aa16.31■□□□□ 0.2
TRAF4-209ENST00000473421 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-209ENST00000473421 AOX1Q06278 1338 aa16.3■□□□□ 0.2
TRAF4-209ENST00000473421 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
TRAF4-209ENST00000473421 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
TRAF4-209ENST00000473421 LDLRAD1Q5T700 205 aa16.29■□□□□ 0.2
TRAF4-209ENST00000473421 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
TRAF4-209ENST00000473421 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
TRAF4-209ENST00000473421 TSR2Q969E8 191 aaKnown RBP16.29■□□□□ 0.2
TRAF4-209ENST00000473421 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
TRAF4-209ENST00000473421 GNAI1P63096 354 aa16.28■□□□□ 0.2
TRAF4-209ENST00000473421 CAP1Q01518 475 aa16.28■□□□□ 0.2
TRAF4-209ENST00000473421 STRIP1Q5VSL9 837 aa16.28■□□□□ 0.2
TRAF4-209ENST00000473421 CERS5Q8N5B7 392 aa16.28■□□□□ 0.2
TRAF4-209ENST00000473421 CLMNQ96JQ2 1002 aa16.28■□□□□ 0.2
TRAF4-209ENST00000473421 CDC5LQ99459 802 aaKnown RBP16.28■□□□□ 0.2
TRAF4-209ENST00000473421 MYH3P11055 1940 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 BRCA2P51587 3418 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 H7C1W4 665 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 GTF2IP78347 998 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 PKN2Q16513 984 aaKnown RBP16.27■□□□□ 0.2
TRAF4-209ENST00000473421 SPRYD7Q5W111 196 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 FBXO46Q6PJ61 603 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-209ENST00000473421 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
TRAF4-209ENST00000473421 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.2
TRAF4-209ENST00000473421 IRS2Q9Y4H2 1338 aa16.26■□□□□ 0.19
TRAF4-209ENST00000473421 CASP7P55210 303 aa16.26■□□□□ 0.19
TRAF4-209ENST00000473421 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
TRAF4-209ENST00000473421 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
TRAF4-209ENST00000473421 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
TRAF4-209ENST00000473421 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
TRAF4-209ENST00000473421 FKTNO75072 461 aa16.25■□□□□ 0.19
TRAF4-209ENST00000473421 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
TRAF4-209ENST00000473421 NOM1Q5C9Z4 860 aaKnown RBP16.25■□□□□ 0.19
TRAF4-209ENST00000473421 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRAF4-209ENST00000473421 ITGA6P23229 1130 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 GJA5P36382 358 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-209ENST00000473421 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 DEFB129Q9H1M3 183 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 LEMD3Q9Y2U8 911 aa16.24■□□□□ 0.19
TRAF4-209ENST00000473421 TAF5LO75529 589 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 NF2P35240 595 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 ARMC9Q7Z3E5 817 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-209ENST00000473421 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
TRAF4-209ENST00000473421 MYO3BQ8WXR4 1341 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 CLRN2A0PK11 232 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 F8W031 263 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-209ENST00000473421 CSF1RP07333 972 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 CHRNDQ07001 517 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 SREBF2Q12772 1141 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 GCKRQ14397 625 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 OTOP1Q7RTM1 612 aa16.22■□□□□ 0.19
TRAF4-209ENST00000473421 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-209ENST00000473421 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
TRAF4-209ENST00000473421 NBPF12Q5TAG4 269 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-209ENST00000473421 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
TRAF4-209ENST00000473421 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
TRAF4-209ENST00000473421 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
TRAF4-209ENST00000473421 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
TRAF4-209ENST00000473421 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
TRAF4-209ENST00000473421 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
TRAF4-209ENST00000473421 MAP3K11Q16584 847 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms