RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 GSDMDP57764 484 aa16.64■□□□□ 0.25
NHLRC3-204ENST00000473371 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
NHLRC3-204ENST00000473371 ERO1AQ96HE7 468 aa16.64■□□□□ 0.25
NHLRC3-204ENST00000473371 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
NHLRC3-204ENST00000473371 KMT5BQ4FZB7 885 aa16.63■□□□□ 0.25
NHLRC3-204ENST00000473371 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
NHLRC3-204ENST00000473371 RBM33Q96EV2 1170 aaKnown RBP16.63■□□□□ 0.25
NHLRC3-204ENST00000473371 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
NHLRC3-204ENST00000473371 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 MRPS27Q92552 414 aaKnown RBP16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 KIF2AO00139 706 aaPredicted RBP16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 ELF2Q15723 593 aa16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
NHLRC3-204ENST00000473371 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
NHLRC3-204ENST00000473371 GCP02774 474 aa16.61■□□□□ 0.25
NHLRC3-204ENST00000473371 PCDHA7Q9UN72 937 aa16.61■□□□□ 0.25
NHLRC3-204ENST00000473371 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
NHLRC3-204ENST00000473371 ARHGEF25Q86VW2 580 aa16.61■□□□□ 0.25
NHLRC3-204ENST00000473371 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 GOLIM4O00461 696 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 EXOSC10Q01780 885 aaKnown RBP16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 SF3A1Q15459 793 aaKnown RBP16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 SMC2O95347 1197 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 E7EWF7 191 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 FBXO38Q6PIJ6 1188 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 IMPACTQ9P2X3 320 aa16.6■□□□□ 0.25
NHLRC3-204ENST00000473371 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 NPHP1O15259 732 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 STK38Q15208 465 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 ADALQ6DHV7 355 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 TMC6Q7Z403 805 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
NHLRC3-204ENST00000473371 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 PAG1Q9NWQ8 432 aa16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 IFNKQ9P0W0 207 aa16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 CARMIL3Q8ND23 1372 aa16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.25
NHLRC3-204ENST00000473371 A0A087WZG4 1122 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 A0A0G2JLW4 131 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 NDUFA8P51970 172 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 ZNF274Q96GC6 653 aaPredicted RBP16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 XPO4Q9C0E2 1151 aaKnown RBP16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 RTEL1Q9NZ71 1219 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 CCDC150Q8NCX0 1101 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 KIAA1468Q9P260 1216 aa16.58■□□□□ 0.24
NHLRC3-204ENST00000473371 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 A0A1W2PQD8 194 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 TPM4P67936 248 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 SLC52A2Q9HAB3 445 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 NRDCO43847 1150 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 SFPQP23246 707 aaKnown RBP eCLIP16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 LMBR1LQ6UX01 489 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 PPP1R13BQ96KQ4 1090 aa16.57■□□□□ 0.24
NHLRC3-204ENST00000473371 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 BIN1O00499 593 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 TERF2Q15554 542 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 FDPSP14324 419 aaKnown RBP16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 SYT10Q6XYQ8 523 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 LINC00301Q8NCQ3 95 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 SYTL4Q96C24 671 aaPredicted RBP16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
NHLRC3-204ENST00000473371 C5P01031 1676 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 TAF3Q5VWG9 929 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 ERBB3P21860 1342 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 KCNG4Q8TDN1 519 aa16.55■□□□□ 0.24
NHLRC3-204ENST00000473371 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms