RNA–Protein interactions for RNA: ENST00000473002.1

ITGA4-206, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-206ENST00000473002 CNTN3Q9P232 1028 aa8.78□□□□□ -1
ITGA4-206ENST00000473002 POLIQ9UNA4 740 aa8.78□□□□□ -1
ITGA4-206ENST00000473002 TIMELESSQ9UNS1 1208 aa8.78□□□□□ -1
ITGA4-206ENST00000473002 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
ITGA4-206ENST00000473002 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
ITGA4-206ENST00000473002 ZNF211Q13398 564 aaPredicted RBP8.77□□□□□ -1.01
ITGA4-206ENST00000473002 AAMPQ13685 434 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 NCAPG2Q86XI2 1143 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 TTC16Q8NEE8 873 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 RASSF4Q9H2L5 321 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
ITGA4-206ENST00000473002 SMNDC1O75940 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
ITGA4-206ENST00000473002 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
ITGA4-206ENST00000473002 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
ITGA4-206ENST00000473002 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
ITGA4-206ENST00000473002 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
ITGA4-206ENST00000473002 C1orf127Q8N9H9 656 aa8.76□□□□□ -1.01
ITGA4-206ENST00000473002 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
ITGA4-206ENST00000473002 DLL1O00548 723 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 NKAPLQ5M9Q1 402 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 CEP120Q8N960 986 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 LACRTQ9GZZ8 138 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 SEMA6BQ9H3T3 888 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.75□□□□□ -1.01
ITGA4-206ENST00000473002 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
ITGA4-206ENST00000473002 FZD6O60353 706 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 CES1P23141 567 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 SETDB1Q15047 1291 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 PBX4Q9BYU1 374 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 MUC3BQ9H195 1237 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 SRA1Q9HD15 236 aaKnown RBP8.74□□□□□ -1.01
ITGA4-206ENST00000473002 SALL4Q9UJQ4 1053 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
ITGA4-206ENST00000473002 ERCC6L2Q5T890 1561 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 ITGB7P26010 798 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 ADAMTSL4Q6UY14 1074 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 MAP4K3Q8IVH8 894 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 RETREG2Q8NC44 543 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 CHRDQ9H2X0 955 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 EGFL7Q9UHF1 273 aa8.73□□□□□ -1.01
ITGA4-206ENST00000473002 CDC27P30260 824 aa8.72□□□□□ -1.01
ITGA4-206ENST00000473002 USP5P45974 858 aa8.72□□□□□ -1.01
ITGA4-206ENST00000473002 SERPINB4P48594 390 aa8.72□□□□□ -1.01
ITGA4-206ENST00000473002 WFDC12Q8WWY7 111 aa8.72□□□□□ -1.01
ITGA4-206ENST00000473002 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
ITGA4-206ENST00000473002 LINC01387J3KSC0 135 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 DYRK3O43781 588 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 ICMTO60725 284 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 ACPPP15309 386 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 NOS3P29474 1203 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 EHHADHQ08426 723 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
ITGA4-206ENST00000473002 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
ITGA4-206ENST00000473002 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
ITGA4-206ENST00000473002 WDR97A6NE52 1622 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 TNFRSF21O75509 655 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 IREB2P48200 963 aaKnown RBP8.7□□□□□ -1.02
ITGA4-206ENST00000473002 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 GJD3Q8N144 294 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 DCAF11Q8TEB1 546 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 SNX29Q8TEQ0 813 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
ITGA4-206ENST00000473002 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
ITGA4-206ENST00000473002 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
ITGA4-206ENST00000473002 H3BRB1 525 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 NFKBIEO00221 500 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 EREGO14944 169 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 PHACTR2O75167 634 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 PTPRAP18433 802 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 EPHA1P21709 976 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 GALNT11Q8NCW6 608 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 ADAM19Q9H013 955 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
ITGA4-206ENST00000473002 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
ITGA4-206ENST00000473002 DZANK1Q9NVP4 752 aa8.69□□□□□ -1.02
ITGA4-206ENST00000473002 FOXD3Q9UJU5 478 aaPredicted RBP8.69□□□□□ -1.02
ITGA4-206ENST00000473002 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
ITGA4-206ENST00000473002 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
ITGA4-206ENST00000473002 CDC25BP30305 580 aa8.68□□□□□ -1.02
ITGA4-206ENST00000473002 GLYCTKQ8IVS8 523 aa8.68□□□□□ -1.02
ITGA4-206ENST00000473002 AKTIPQ9H8T0 292 aa8.68□□□□□ -1.02
ITGA4-206ENST00000473002 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
ITGA4-206ENST00000473002 TRPA1O75762 1119 aa8.67□□□□□ -1.02
ITGA4-206ENST00000473002 ECM1Q16610 540 aa8.67□□□□□ -1.02
ITGA4-206ENST00000473002 TMEM130Q8N3G9 435 aa8.67□□□□□ -1.02
ITGA4-206ENST00000473002 MEGF10Q96KG7 1140 aa8.67□□□□□ -1.02
ITGA4-206ENST00000473002 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
ITGA4-206ENST00000473002 PDE2AO00408 941 aaPredicted RBP8.66□□□□□ -1.02
ITGA4-206ENST00000473002 TM4SF5O14894 197 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 FSCN2O14926 492 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 ALX3O95076 343 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 PDE4CQ08493 712 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 FAM117BQ6P1L5 589 aa8.66□□□□□ -1.02
ITGA4-206ENST00000473002 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms