RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMARCD3-209ENST00000472988 XDHP47989 1333 aa23.36■■□□□ 1.33
SMARCD3-209ENST00000472988 KLRK1P26718 216 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 GPSM2P81274 684 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 SCARF1Q14162 830 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 EDC3Q96F86 508 aaKnown RBP23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 ATP6V0A2Q9Y487 856 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 ZNF804BA4D1E1 1349 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 SEC24BO95487 1268 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 KCNJ4P48050 445 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 DNAJC2Q99543 621 aaKnown RBP23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 ANKIB1Q9P2G1 1089 aa23.35■■□□□ 1.33
SMARCD3-209ENST00000472988 IRS2Q9Y4H2 1338 aa23.34■■□□□ 1.33
SMARCD3-209ENST00000472988 ARID4AP29374 1257 aaPredicted RBP23.34■■□□□ 1.33
SMARCD3-209ENST00000472988 SP8Q8IXZ3 490 aa23.34■■□□□ 1.33
SMARCD3-209ENST00000472988 EVI5LQ96CN4 794 aa23.34■■□□□ 1.33
SMARCD3-209ENST00000472988 ZNF512BQ96KM6 892 aaPredicted RBP23.34■■□□□ 1.33
SMARCD3-209ENST00000472988 PTGER2P43116 358 aa23.33■■□□□ 1.33
SMARCD3-209ENST00000472988 MCAMP43121 646 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 BCAMP50895 628 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 PRPF40BQ6NWY9 871 aaKnown RBP23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 GYG1P46976 350 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 OLFM4Q6UX06 510 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 CNKSR1Q969H4 720 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
SMARCD3-209ENST00000472988 UQCRFS1P1P0C7P4 283 aa23.31■■□□□ 1.32
SMARCD3-209ENST00000472988 SNRKQ9NRH2 765 aa23.31■■□□□ 1.32
SMARCD3-209ENST00000472988 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
SMARCD3-209ENST00000472988 DPEP1P16444 411 aa23.3■■□□□ 1.32
SMARCD3-209ENST00000472988 CHMLP26374 656 aa23.3■■□□□ 1.32
SMARCD3-209ENST00000472988 COL1A1P02452 1464 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-209ENST00000472988 GOLIM4O00461 696 aa23.29■■□□□ 1.32
SMARCD3-209ENST00000472988 UFL1O94874 794 aa23.29■■□□□ 1.32
SMARCD3-209ENST00000472988 TXNRD3Q86VQ6 643 aa23.29■■□□□ 1.32
SMARCD3-209ENST00000472988 FAM84BQ96KN1 310 aaPredicted RBP23.29■■□□□ 1.32
SMARCD3-209ENST00000472988 GPR101Q96P66 508 aaPredicted RBP23.29■■□□□ 1.32
SMARCD3-209ENST00000472988 A0A0G2JLW4 131 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 KCNA3P22001 575 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 ATP2B4P23634 1241 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 ZAP70P43403 619 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 FKBP4Q02790 459 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 RASGRF1Q13972 1273 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 ANTXR1Q9H6X2 564 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 GGA1Q9UJY5 639 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 SNED1Q8TER0 1413 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 CAVIN4Q5BKX8 364 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 FBXO33Q7Z6M2 555 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 TBC1D16Q8TBP0 767 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 HMG20BQ9P0W2 317 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
SMARCD3-209ENST00000472988 RFX7Q2KHR2 1363 aa23.27■■□□□ 1.32
SMARCD3-209ENST00000472988 CHD4Q14839 1912 aa23.26■■□□□ 1.31
SMARCD3-209ENST00000472988 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
SMARCD3-209ENST00000472988 KBTBD3Q8NAB2 608 aa23.26■■□□□ 1.31
SMARCD3-209ENST00000472988 MFAP1P55081 439 aaKnown RBP23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 TGFB2P61812 414 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 SPATA5Q8NB90 893 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 C7orf43Q8WVR3 580 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 MED23Q9ULK4 1368 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 VPS37DQ86XT2 251 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 MPNDQ8N594 471 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 ESYT1Q9BSJ8 1104 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 IL25Q9H293 177 aa23.25■■□□□ 1.31
SMARCD3-209ENST00000472988 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
SMARCD3-209ENST00000472988 HIBADHP31937 336 aaKnown RBP23.24■■□□□ 1.31
SMARCD3-209ENST00000472988 TTLL6Q8N841 843 aa23.24■■□□□ 1.31
SMARCD3-209ENST00000472988 GNL3LQ9NVN8 582 aaKnown RBP23.24■■□□□ 1.31
SMARCD3-209ENST00000472988 ZNF219Q9P2Y4 722 aaPredicted RBP23.24■■□□□ 1.31
SMARCD3-209ENST00000472988 C6orf229H3BNL8 230 aa23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 DIAPH3Q9NSV4 1193 aa23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 PPP1R1BQ9UD71 204 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 MAST2Q6P0Q8 1798 aa23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 CCDC88AQ3V6T2 1871 aa23.23■■□□□ 1.31
SMARCD3-209ENST00000472988 CHGBP05060 677 aa23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 KLHL34Q8N239 644 aa23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 SPON1Q9HCB6 807 aa23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 PIH1D3Q9NQM4 214 aaKnown RBP23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 CD2APQ9Y5K6 639 aa23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 CWC27Q6UX04 472 aaKnown RBP23.22■■□□□ 1.31
SMARCD3-209ENST00000472988 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 FER1L6Q2WGJ9 1857 aa23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 HIP1O00291 1037 aa23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 SEMA3EO15041 775 aa23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 FAM227BQ96M60 508 aa23.21■■□□□ 1.31
SMARCD3-209ENST00000472988 ZNF646O15015 1829 aaPredicted RBP23.2■■□□□ 1.3
SMARCD3-209ENST00000472988 ZNF804AQ7Z570 1209 aa23.2■■□□□ 1.3
SMARCD3-209ENST00000472988 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
SMARCD3-209ENST00000472988 ZBTB22O15209 634 aa23.19■■□□□ 1.3
SMARCD3-209ENST00000472988 C21orf2O43822 256 aa23.19■■□□□ 1.3
SMARCD3-209ENST00000472988 TTF1Q15361 905 aaPredicted RBP23.19■■□□□ 1.3
SMARCD3-209ENST00000472988 DENND2AQ9ULE3 1009 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms