RNA–Protein interactions for RNA: ENST00000472827.1

LMBRD1-203, Transcript of LMBR1 domain containing 1, humanhuman

TSL 5

Gene LMBRD1, Length 1,861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1-203ENST00000472827 IGHMBP2P38935 993 aaKnown RBP12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 CTSWP56202 376 aa12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 SCN9AQ15858 1988 aa12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 COL4A1P02462 1669 aa12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 CTU1Q7Z7A3 348 aaKnown RBP12.51□□□□□ -0.41
LMBRD1-203ENST00000472827 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 PODNQ7Z5L7 613 aa12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 BSDC1Q9NW68 430 aaPredicted RBP12.5□□□□□ -0.41
LMBRD1-203ENST00000472827 ANGEL2Q5VTE6 544 aaKnown RBP12.49□□□□□ -0.41
LMBRD1-203ENST00000472827 FLIIQ13045 1269 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 SCARF1Q14162 830 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 MPHOSPH8Q99549 860 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 HDAC9Q9UKV0 1011 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
LMBRD1-203ENST00000472827 ZNF609O15014 1411 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 FANCIQ9NVI1 1328 aa12.47□□□□□ -0.41
LMBRD1-203ENST00000472827 USP17L3A6NCW0 530 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 USP17L4A6NCW7 530 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 H7C1W4 665 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 KCNJ4P48050 445 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 USP17L1Q7RTZ2 530 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
LMBRD1-203ENST00000472827 TBC1D8O95759 1140 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 IGKV5-2P06315 115 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 FKBP1BP68106 108 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 GCKRQ14397 625 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 MOB2Q70IA6 237 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 COA1Q9GZY4 146 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
LMBRD1-203ENST00000472827 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 PSME4Q14997 1843 aa12.45□□□□□ -0.42
LMBRD1-203ENST00000472827 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 PRAMEF18Q5VWM3 479 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 PITPNM2Q9BZ72 1349 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 VAMP4O75379 141 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 NF2P35240 595 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 CCT4P50991 539 aaKnown RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 GREM2Q9H772 168 aa12.44□□□□□ -0.42
LMBRD1-203ENST00000472827 ITGA6P23229 1130 aa12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 STRIP1Q5VSL9 837 aa12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 GMLQ99445 158 aa12.43□□□□□ -0.42
LMBRD1-203ENST00000472827 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 CSF1RP07333 972 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
LMBRD1-203ENST00000472827 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
LMBRD1-203ENST00000472827 GPR25O00155 361 aa12.41□□□□□ -0.42
LMBRD1-203ENST00000472827 G2E3Q7L622 706 aa12.41□□□□□ -0.42
LMBRD1-203ENST00000472827 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
LMBRD1-203ENST00000472827 TM4SF4P48230 202 aa12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 FBXO46Q6PJ61 603 aaPredicted RBP12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 ZNF804AQ7Z570 1209 aa12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 PRKG1Q13976 671 aa12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 MXD3Q9BW11 206 aa12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 SRCIN1Q9C0H9 1055 aa12.4□□□□□ -0.42
LMBRD1-203ENST00000472827 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
LMBRD1-203ENST00000472827 WTIPA6NIX2 430 aaPredicted RBP12.39□□□□□ -0.43
LMBRD1-203ENST00000472827 GRM8O00222 908 aa12.39□□□□□ -0.43
LMBRD1-203ENST00000472827 SREBF2Q12772 1141 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms