RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
SMARCD3-208ENST00000472789 GJA3Q9Y6H8 435 aa13.07□□□□□ -0.32
SMARCD3-208ENST00000472789 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
SMARCD3-208ENST00000472789 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 MTX1Q13505 466 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
SMARCD3-208ENST00000472789 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 ECE2O60344 883 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 RAD17O75943 681 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 KLRK1P26718 216 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 COPRSQ9NQ92 184 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
SMARCD3-208ENST00000472789 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 FZD9O00144 591 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 SURF6O75683 361 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 CIAO1O76071 339 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 COL4A5P29400 1685 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 MED23Q9ULK4 1368 aa13.04□□□□□ -0.32
SMARCD3-208ENST00000472789 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 PDE8BO95263 885 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 UBE4AQ14139 1066 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
SMARCD3-208ENST00000472789 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
SMARCD3-208ENST00000472789 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 SLC5A1P13866 664 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 CXCL9Q07325 125 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 POLA2Q14181 598 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 TNIP1Q15025 636 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 COA1Q9GZY4 146 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
SMARCD3-208ENST00000472789 APBB1O00213 710 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 GYG1P46976 350 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 TFCP2Q12800 502 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 GPC2Q8N158 579 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
SMARCD3-208ENST00000472789 PSMD14O00487 310 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
SMARCD3-208ENST00000472789 IGHDP01880 384 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
SMARCD3-208ENST00000472789 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
SMARCD3-208ENST00000472789 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
SMARCD3-208ENST00000472789 PODNQ7Z5L7 613 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 LPIN2Q92539 896 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
SMARCD3-208ENST00000472789 POTECB2RU33 542 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 C15orf52Q6ZUT6 534 aaKnown RBP12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 CD209Q9NNX6 404 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
SMARCD3-208ENST00000472789 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 BCAMP50895 628 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 GTF2IP78347 998 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
SMARCD3-208ENST00000472789 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 FGFR2P21802 821 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 TIMM10P62072 90 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 CHAF1AQ13111 956 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-208ENST00000472789 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms