RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
CLK1-209ENST00000472679 POP1Q99575 1024 aaKnown RBP9.91□□□□□ -0.82
CLK1-209ENST00000472679 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
CLK1-209ENST00000472679 ALG1LQ6GMV1 187 aa9.9□□□□□ -0.82
CLK1-209ENST00000472679 TTC9Q92623 222 aa9.9□□□□□ -0.82
CLK1-209ENST00000472679 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
CLK1-209ENST00000472679 LILRB5O75023 590 aa9.89□□□□□ -0.83
CLK1-209ENST00000472679 ATP2B2Q01814 1243 aa9.89□□□□□ -0.83
CLK1-209ENST00000472679 KIAA0319Q5VV43 1072 aa9.89□□□□□ -0.83
CLK1-209ENST00000472679 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
CLK1-209ENST00000472679 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
CLK1-209ENST00000472679 NXPE3Q969Y0 559 aa9.89□□□□□ -0.83
CLK1-209ENST00000472679 PDE2AO00408 941 aaPredicted RBP9.88□□□□□ -0.83
CLK1-209ENST00000472679 GADD45BO75293 160 aaPredicted RBP9.88□□□□□ -0.83
CLK1-209ENST00000472679 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
CLK1-209ENST00000472679 SMNDC1O75940 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLK1-209ENST00000472679 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
CLK1-209ENST00000472679 FBF1Q8TES7 1133 aa9.88□□□□□ -0.83
CLK1-209ENST00000472679 TCF12Q99081 682 aa9.88□□□□□ -0.83
CLK1-209ENST00000472679 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
CLK1-209ENST00000472679 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
CLK1-209ENST00000472679 METTL12A8MUP2 240 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 NID1P14543 1247 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 GRM2Q14416 872 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 GIPC2Q8TF65 315 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 EHD4Q9H223 541 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 LIN7BQ9HAP6 207 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
CLK1-209ENST00000472679 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 BAG6P46379 1132 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 CCNJLQ8IV13 435 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 TRIM11Q96F44 468 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 SUV39H2Q9H5I1 410 aa9.86□□□□□ -0.83
CLK1-209ENST00000472679 GRIA4P48058 902 aa9.85□□□□□ -0.83
CLK1-209ENST00000472679 BCO2Q9BYV7 579 aa9.85□□□□□ -0.83
CLK1-209ENST00000472679 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
CLK1-209ENST00000472679 BHLHE41Q9C0J9 482 aaPredicted RBP9.85□□□□□ -0.83
CLK1-209ENST00000472679 SH2B1Q9NRF2 756 aaPredicted RBP9.85□□□□□ -0.83
CLK1-209ENST00000472679 PARP2Q9UGN5 583 aa9.85□□□□□ -0.83
CLK1-209ENST00000472679 SPRED3Q2MJR0 410 aa9.84□□□□□ -0.83
CLK1-209ENST00000472679 NXPE4Q6UWF7 544 aa9.84□□□□□ -0.83
CLK1-209ENST00000472679 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
CLK1-209ENST00000472679 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
CLK1-209ENST00000472679 ZNF16P17020 682 aaPredicted RBP9.83□□□□□ -0.84
CLK1-209ENST00000472679 ILDR2Q71H61 639 aa9.83□□□□□ -0.84
CLK1-209ENST00000472679 ASAP3Q8TDY4 903 aa9.83□□□□□ -0.84
CLK1-209ENST00000472679 ABCB6Q9NP58 842 aa9.83□□□□□ -0.84
CLK1-209ENST00000472679 PTPRAP18433 802 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 CDC27P30260 824 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
CLK1-209ENST00000472679 ADAM19Q9H013 955 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 MUC3BQ9H195 1237 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 MKL2Q9ULH7 1088 aa9.82□□□□□ -0.84
CLK1-209ENST00000472679 RBM47A0AV96 593 aaKnown RBP9.81□□□□□ -0.84
CLK1-209ENST00000472679 EPHA1P21709 976 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 CDC25BP30305 580 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 GNA15P30679 374 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
CLK1-209ENST00000472679 WFDC8Q8IUA0 241 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
CLK1-209ENST00000472679 A0A096LPE4 126 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 A0A1W2PPZ6 126 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 GNB5O14775 395 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 DAB2P98082 770 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 TXNDC11Q6PKC3 985 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 VN1R5Q7Z5H4 357 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 BEND7Q8N7W2 519 aaPredicted RBP9.8□□□□□ -0.84
CLK1-209ENST00000472679 BSNDQ8WZ55 320 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
CLK1-209ENST00000472679 FCGRTP55899 365 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 FGD1P98174 961 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
CLK1-209ENST00000472679 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 PODNQ7Z5L7 613 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 TRAK1Q9UPV9 953 aa9.79□□□□□ -0.84
CLK1-209ENST00000472679 LINC01387J3KSC0 135 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 XPCQ01831 940 aaPredicted RBP9.78□□□□□ -0.84
CLK1-209ENST00000472679 PSMD2Q13200 908 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 TMC4Q7Z404 712 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 C12orf49Q9H741 205 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 PPME1Q9Y570 386 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
CLK1-209ENST00000472679 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 FAM229AH3BQW9 127 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 ITPKAP23677 461 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 HGSNATQ68CP4 663 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 CACTIN-AS1Q8N1I8 211 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
CLK1-209ENST00000472679 FRMD6Q96NE9 622 aa9.77□□□□□ -0.85
CLK1-209ENST00000472679 A0A0A0MRY4 1105 aa9.76□□□□□ -0.85
CLK1-209ENST00000472679 GIPC1O14908 333 aa9.76□□□□□ -0.85
CLK1-209ENST00000472679 DEAF1O75398 565 aaPredicted RBP9.76□□□□□ -0.85
CLK1-209ENST00000472679 COL8A1P27658 744 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms