RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C1orf167Q5SNV9 1468 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 SETD1AO15047 1707 aaKnown RBP5.21□□□□□ -1.58
XRN1-209ENST00000472625 BMP4P12644 408 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 FGFR3P22607 806 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 SNRPNP63162 240 aaKnown RBP5.21□□□□□ -1.58
XRN1-209ENST00000472625 ANKMY2Q8IV38 441 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 STK32AQ8WU08 396 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 C8orf37Q96NL8 207 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 ZIC5Q96T25 663 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 CFHR5Q9BXR6 569 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 NIFKQ9BYG3 293 aaKnown RBP5.21□□□□□ -1.58
XRN1-209ENST00000472625 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 ENAMQ9NRM1 1142 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 CABP1Q9NZU7 370 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 TRPC5Q9UL62 973 aaPredicted RBP5.21□□□□□ -1.58
XRN1-209ENST00000472625 NSFL1CQ9UNZ2 370 aaKnown RBP5.21□□□□□ -1.58
XRN1-209ENST00000472625 LAMC1P11047 1609 aa5.21□□□□□ -1.58
XRN1-209ENST00000472625 MYO5BQ9ULV0 1848 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 METP08581 1390 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 ANKRD30BQ9BXX2 1392 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 EP400Q96L91 3159 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 BACH1O14867 736 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 OIP5O43482 229 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 RFX1P22670 979 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 WEE1P30291 646 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 NOS2P35228 1153 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 ITGAEP38570 1179 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 MAP2K3P46734 347 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 SEC13P55735 322 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 ELOAQ14241 798 aaKnown RBP5.2□□□□□ -1.58
XRN1-209ENST00000472625 ARSJQ5FYB0 599 aaPredicted RBP5.2□□□□□ -1.58
XRN1-209ENST00000472625 CCDC82Q8N4S0 544 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 GALNT6Q8NCL4 622 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 L3MBTL2Q969R5 705 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 ZCCHC2Q9C0B9 1178 aaKnown RBP5.2□□□□□ -1.58
XRN1-209ENST00000472625 ZDHHC3Q9NYG2 299 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 ATXN7L1Q9ULK2 861 aaPredicted RBP5.2□□□□□ -1.58
XRN1-209ENST00000472625 PHF24Q9UPV7 400 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 DNMT3AQ9Y6K1 912 aaPredicted RBP5.2□□□□□ -1.58
XRN1-209ENST00000472625 CCDC144AA2RUR9 1427 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 RGS12O14924 1447 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 TECPR2O15040 1411 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 NAIPQ13075 1403 aa5.2□□□□□ -1.58
XRN1-209ENST00000472625 CLTCL1P53675 1640 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 A0A1W2PNR3 127 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 CD33P20138 364 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 OCLNQ16625 522 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 KANK3Q6NY19 840 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 STAG2Q8N3U4 1231 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 C2orf49Q9BVC5 232 aaPredicted RBP5.19□□□□□ -1.58
XRN1-209ENST00000472625 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 QTRT2Q9H974 415 aaKnown RBP5.19□□□□□ -1.58
XRN1-209ENST00000472625 RRAGCQ9HB90 399 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 GGA1Q9UJY5 639 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 USP21Q9UK80 565 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 NALCNQ8IZF0 1738 aa5.19□□□□□ -1.58
XRN1-209ENST00000472625 KIF1BO60333 1816 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 KHNYNO15037 678 aaKnown RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 ATXN7O15265 892 aaPredicted RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 ATG7O95352 703 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 ITGB2P05107 769 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 GRNP28799 593 aaKnown RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 LBRQ14739 615 aaKnown RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 PODNQ7Z5L7 613 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 C1orf216Q8TAB5 229 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 EDARADDQ8WWZ3 215 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 DCAF5Q96JK2 942 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 NOVA2Q9UNW9 492 aaKnown RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 BCS1LQ9Y276 419 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 COL22A1Q8NFW1 1626 aaPredicted RBP5.18□□□□□ -1.58
XRN1-209ENST00000472625 MYOM2P54296 1465 aa5.18□□□□□ -1.58
XRN1-209ENST00000472625 EIF3AQ14152 1382 aaKnown RBP5.17□□□□□ -1.58
XRN1-209ENST00000472625 ROBO2Q9HCK4 1378 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 NEURL1BA8MQ27 555 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 PHF20L1A8MW92 1017 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 EFSO43281 561 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 MAPTP10636 758 aaKnown RBP5.17□□□□□ -1.58
XRN1-209ENST00000472625 AMPD1P23109 780 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 GRIN2CQ14957 1233 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 NBPF1Q3BBV0 1214 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 PLA2G4EQ3MJ16 856 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 TMEM164Q5U3C3 297 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 BICDL1Q6ZP65 573 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 STRN4Q9NRL3 753 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 PCDHGC4Q9Y5F7 938 aa5.17□□□□□ -1.58
XRN1-209ENST00000472625 ARHGEF10O15013 1369 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 ATRNO75882 1429 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 KIF1AQ12756 1690 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 TMEM88BA6NKF7 163 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 HOXB4P17483 251 aaPredicted RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 TATP17735 454 aaPredicted RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 PSMA6P60900 246 aaKnown RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 TNP2Q05952 138 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 SF3B2Q13435 895 aaKnown RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 FAM26DQ5JW98 314 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 LARP1Q6PKG0 1096 aaKnown RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 CAPN12Q6ZSI9 719 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 NLRP8Q86W28 1048 aa5.16□□□□□ -1.58
XRN1-209ENST00000472625 BEND7Q8N7W2 519 aaPredicted RBP5.16□□□□□ -1.58
XRN1-209ENST00000472625 GOLGA6L1Q8N7Z2 621 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms