RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ATP2B3Q16720 1220 aa17.84■□□□□ 0.45
UBXN11-213ENST00000472155 TSPY26PQ9H489 355 aa17.84■□□□□ 0.45
UBXN11-213ENST00000472155 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
UBXN11-213ENST00000472155 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
UBXN11-213ENST00000472155 CTDNEP1O95476 244 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 MPNDQ8N594 471 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 DSCC1Q9BVC3 393 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 CNNM1Q9NRU3 951 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 FGD1P98174 961 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
UBXN11-213ENST00000472155 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.44
UBXN11-213ENST00000472155 DOT1LQ8TEK3 1739 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 CLCN1P35523 988 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 KCNQ4P56696 695 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 EXOSC10Q01780 885 aaKnown RBP17.82■□□□□ 0.44
UBXN11-213ENST00000472155 RAB11FIP4Q86YS3 637 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 NWD2Q9ULI1 1742 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
UBXN11-213ENST00000472155 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
UBXN11-213ENST00000472155 VGLL2Q8N8G2 317 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 MARCH10Q8NA82 808 aaPredicted RBP17.82■□□□□ 0.44
UBXN11-213ENST00000472155 PDLIM2Q96JY6 352 aa17.82■□□□□ 0.44
UBXN11-213ENST00000472155 ITPK1Q13572 414 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 SEC31BQ9NQW1 1179 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 AKAP2Q9Y2D5 859 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 KCNQ2O43526 872 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 LIG1P18858 919 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 PHKA1P46020 1223 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
UBXN11-213ENST00000472155 ATP6V1DQ9Y5K8 247 aa17.81■□□□□ 0.44
UBXN11-213ENST00000472155 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
UBXN11-213ENST00000472155 FGAP02671 866 aa17.8■□□□□ 0.44
UBXN11-213ENST00000472155 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBXN11-213ENST00000472155 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
UBXN11-213ENST00000472155 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
UBXN11-213ENST00000472155 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
UBXN11-213ENST00000472155 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
UBXN11-213ENST00000472155 DDB1Q16531 1140 aa17.79■□□□□ 0.44
UBXN11-213ENST00000472155 ZNF34Q8IZ26 560 aa17.79■□□□□ 0.44
UBXN11-213ENST00000472155 SPATA31A1Q5TZJ5 1347 aa17.79■□□□□ 0.44
UBXN11-213ENST00000472155 NSUN7Q8NE18 718 aaKnown RBP17.79■□□□□ 0.44
UBXN11-213ENST00000472155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBXN11-213ENST00000472155 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
UBXN11-213ENST00000472155 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
UBXN11-213ENST00000472155 MYH3P11055 1940 aa17.78■□□□□ 0.44
UBXN11-213ENST00000472155 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
UBXN11-213ENST00000472155 EIF5P55010 431 aaKnown RBP17.78■□□□□ 0.44
UBXN11-213ENST00000472155 GUCY1B3Q02153 619 aa17.78■□□□□ 0.44
UBXN11-213ENST00000472155 CEBPZQ03701 1054 aaKnown RBP17.78■□□□□ 0.44
UBXN11-213ENST00000472155 CAMK4Q16566 473 aa17.78■□□□□ 0.44
UBXN11-213ENST00000472155 ANKRD36CQ5JPF3 1778 aa17.78■□□□□ 0.44
UBXN11-213ENST00000472155 GPAA1O43292 621 aa17.77■□□□□ 0.44
UBXN11-213ENST00000472155 PDE8AO60658 829 aa17.77■□□□□ 0.44
UBXN11-213ENST00000472155 PFKFB2O60825 505 aa17.77■□□□□ 0.44
UBXN11-213ENST00000472155 WTIPA6NIX2 430 aaPredicted RBP17.77■□□□□ 0.43
UBXN11-213ENST00000472155 PDE8BO95263 885 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 PDCP20941 246 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 KRT85P78386 507 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 RESTQ13127 1097 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 CCDC102BQ68D86 513 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 COL4A1P02462 1669 aa17.77■□□□□ 0.43
UBXN11-213ENST00000472155 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
UBXN11-213ENST00000472155 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
UBXN11-213ENST00000472155 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 NBPF3Q9H094 633 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 WWC3Q9ULE0 1092 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 PLCH1Q4KWH8 1693 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 SIK1P57059 783 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 SLC9C2Q5TAH2 1124 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 LEO1Q8WVC0 666 aaPredicted RBP17.76■□□□□ 0.43
UBXN11-213ENST00000472155 PGBD1Q96JS3 809 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 AGXT2Q9BYV1 514 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
UBXN11-213ENST00000472155 OTUD7BQ6GQQ9 843 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 APPBP2Q92624 585 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 FUCA2Q9BTY2 467 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 GJB4Q9NTQ9 266 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 CCDC87Q9NVE4 849 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 USP25Q9UHP3 1055 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 ANTXR2P58335 489 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 EP400Q96L91 3159 aa17.75■□□□□ 0.43
UBXN11-213ENST00000472155 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 AHDC1Q5TGY3 1603 aaPredicted RBP17.74■□□□□ 0.43
UBXN11-213ENST00000472155 H3BQV1 296 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 CAMTA2O94983 1202 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 ADD2P35612 726 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 IFFO2Q5TF58 517 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms