RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 IFIT5Q13325 482 aaKnown RBP14.6□□□□□ -0.07
COL4A3-205ENST00000471862 KIF4BQ2VIQ3 1234 aa14.6□□□□□ -0.07
COL4A3-205ENST00000471862 USP17L1Q7RTZ2 530 aa14.6□□□□□ -0.07
COL4A3-205ENST00000471862 COA1Q9GZY4 146 aa14.6□□□□□ -0.07
COL4A3-205ENST00000471862 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
COL4A3-205ENST00000471862 CELF2O95319 508 aaKnown RBP14.59□□□□□ -0.07
COL4A3-205ENST00000471862 ALDH1L2Q3SY69 923 aa14.59□□□□□ -0.07
COL4A3-205ENST00000471862 DACT2Q5SW24 774 aa14.59□□□□□ -0.07
COL4A3-205ENST00000471862 COL13A1Q5TAT6 717 aaPredicted RBP14.59□□□□□ -0.07
COL4A3-205ENST00000471862 SUCLG2Q96I99 432 aa14.59□□□□□ -0.07
COL4A3-205ENST00000471862 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
COL4A3-205ENST00000471862 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
COL4A3-205ENST00000471862 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
COL4A3-205ENST00000471862 STRIP1Q5VSL9 837 aa14.58□□□□□ -0.08
COL4A3-205ENST00000471862 C15orf52Q6ZUT6 534 aaKnown RBP14.58□□□□□ -0.08
COL4A3-205ENST00000471862 SAPCD2Q86UD0 394 aa14.58□□□□□ -0.08
COL4A3-205ENST00000471862 USP48Q86UV5 1035 aa14.58□□□□□ -0.08
COL4A3-205ENST00000471862 CHMP3Q9Y3E7 222 aa14.58□□□□□ -0.08
COL4A3-205ENST00000471862 SNAP23O00161 211 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 RABL6Q3YEC7 729 aaPredicted RBP14.57□□□□□ -0.08
COL4A3-205ENST00000471862 DLK2Q6UY11 383 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 ZNF594Q96JF6 807 aaPredicted RBP14.57□□□□□ -0.08
COL4A3-205ENST00000471862 HHIPL1Q96JK4 782 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 CAPNS2Q96L46 248 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 WBP1LQ9NX94 342 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 GGA3Q9NZ52 723 aa14.57□□□□□ -0.08
COL4A3-205ENST00000471862 ASTN2O75129 1339 aaPredicted RBP14.57□□□□□ -0.08
COL4A3-205ENST00000471862 ADM5C9JUS6 153 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 FOXN1O15353 648 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 TAF5LO75529 589 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 USP17L8P0C7I0 530 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 CYP4F22Q6NT55 531 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 HELBQ8NG08 1087 aaPredicted RBP14.56□□□□□ -0.08
COL4A3-205ENST00000471862 MXD3Q9BW11 206 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 CD209Q9NNX6 404 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 MYOZ2Q9NPC6 264 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
COL4A3-205ENST00000471862 CT47B1P0C2W7 299 aaPredicted RBP14.55□□□□□ -0.08
COL4A3-205ENST00000471862 ECE1P42892 770 aa14.55□□□□□ -0.08
COL4A3-205ENST00000471862 KCNJ4P48050 445 aa14.55□□□□□ -0.08
COL4A3-205ENST00000471862 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
COL4A3-205ENST00000471862 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
COL4A3-205ENST00000471862 DCPSQ96C86 337 aaKnown RBP14.55□□□□□ -0.08
COL4A3-205ENST00000471862 ZNF408Q9H9D4 720 aa14.55□□□□□ -0.08
COL4A3-205ENST00000471862 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
COL4A3-205ENST00000471862 SCARF1Q14162 830 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 TAF7LQ5H9L4 462 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 TTLL5Q6EMB2 1281 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 BICC1Q9H694 974 aaKnown RBP14.54□□□□□ -0.08
COL4A3-205ENST00000471862 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 PITPNM2Q9BZ72 1349 aa14.54□□□□□ -0.08
COL4A3-205ENST00000471862 IL1R1P14778 569 aa14.53□□□□□ -0.08
COL4A3-205ENST00000471862 MMP14P50281 582 aa14.53□□□□□ -0.08
COL4A3-205ENST00000471862 GTF2IP78347 998 aa14.53□□□□□ -0.08
COL4A3-205ENST00000471862 ANGEL2Q5VTE6 544 aaKnown RBP14.53□□□□□ -0.08
COL4A3-205ENST00000471862 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
COL4A3-205ENST00000471862 CNNM1Q9NRU3 951 aa14.53□□□□□ -0.08
COL4A3-205ENST00000471862 MAP2K1Q02750 393 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-205ENST00000471862 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-205ENST00000471862 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
COL4A3-205ENST00000471862 FBXW7Q969H0 707 aa14.52□□□□□ -0.09
COL4A3-205ENST00000471862 GBA2Q9HCG7 927 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-205ENST00000471862 RIPOR2Q9Y4F9 1068 aa14.52□□□□□ -0.09
COL4A3-205ENST00000471862 ECM29Q5VYK3 1845 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 WNT10BO00744 389 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 AOC2O75106 756 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 MAP2K2P36507 400 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 CTCFP49711 727 aaPredicted RBP14.51□□□□□ -0.09
COL4A3-205ENST00000471862 UBE4AQ14139 1066 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 NBPF9Q3BBW0 867 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 CERS5Q8N5B7 392 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 CDCA5Q96FF9 252 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 ZBED3Q96IU2 234 aaPredicted RBP14.51□□□□□ -0.09
COL4A3-205ENST00000471862 PRDM10Q9NQV6 1147 aa14.51□□□□□ -0.09
COL4A3-205ENST00000471862 PAPPA2Q9BXP8 1791 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 ARAP2Q8WZ64 1704 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 PLIN1O60240 522 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 HSPA8P11142 646 aaKnown RBP14.5□□□□□ -0.09
COL4A3-205ENST00000471862 RARSP54136 660 aaKnown RBP14.5□□□□□ -0.09
COL4A3-205ENST00000471862 HUNKP57058 714 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
COL4A3-205ENST00000471862 ZNF804AQ7Z570 1209 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 KIAA0825Q8IV33 1275 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 OGFOD1Q8N543 542 aa14.5□□□□□ -0.09
COL4A3-205ENST00000471862 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
COL4A3-205ENST00000471862 MROH5Q6ZUA9 1318 aa14.49□□□□□ -0.09
COL4A3-205ENST00000471862 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
COL4A3-205ENST00000471862 GRM1Q13255 1194 aa14.49□□□□□ -0.09
COL4A3-205ENST00000471862 LRRC24Q50LG9 513 aa14.49□□□□□ -0.09
COL4A3-205ENST00000471862 VGLL2Q8N8G2 317 aa14.49□□□□□ -0.09
COL4A3-205ENST00000471862 C2orf69Q8N8R5 385 aa14.49□□□□□ -0.09
COL4A3-205ENST00000471862 FAM205AQ6ZU69 1335 aa14.48□□□□□ -0.09
COL4A3-205ENST00000471862 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-205ENST00000471862 SASH1O94885 1247 aa14.48□□□□□ -0.09
COL4A3-205ENST00000471862 RGMBQ6NW40 437 aa14.48□□□□□ -0.09
COL4A3-205ENST00000471862 TNS4Q8IZW8 715 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms