RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 TRIM5Q9C035 493 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 SGSM2O43147 1006 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 ZSCAN22P10073 491 aaPredicted RBP12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 LMAN1P49257 510 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 TYRO3Q06418 890 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 SIRT2Q8IXJ6 389 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 MRFAP1L1Q96HT8 127 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 PIK3C2AO00443 1686 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 CAVIN2O95810 425 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 KCNJ6P48051 423 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 SASH3O75995 380 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 CCZ1BP86790 482 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 CCZ1P86791 482 aaPredicted RBP12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
CHMP2B-203ENST00000471660 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 KLHL33A6NCF5 533 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 SKILP12757 684 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 PROM2Q8N271 834 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 UBXN4Q92575 508 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 SDSP20132 328 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 USP8P40818 1118 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 FAM43BQ6ZT52 329 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 TADA2BQ86TJ2 420 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
CHMP2B-203ENST00000471660 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 TADA3O75528 432 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 NBPF11Q86T75 865 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 CACNA1FO60840 1977 aa12.53□□□□□ -0.4
CHMP2B-203ENST00000471660 NPHP1O15259 732 aa12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 POLD1P28340 1107 aa12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 ZKSCAN8Q15776 578 aaPredicted RBP12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 LRRN4CLQ8ND94 238 aa12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 PHLPP2Q6ZVD8 1323 aa12.52□□□□□ -0.4
CHMP2B-203ENST00000471660 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 NHSQ6T4R5 1651 aa12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 F13A1P00488 732 aa12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
CHMP2B-203ENST00000471660 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 FUT8Q9BYC5 575 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 SMC2O95347 1197 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
CHMP2B-203ENST00000471660 VAMP4O75379 141 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 SEC31AO94979 1220 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 MAP2K7O14733 419 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 STX6O43752 255 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 LIG1P18858 919 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 ERCC3P19447 782 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 GSDMDP57764 484 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 ARFGAP3Q9NP61 516 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 ABCC6O95255 1503 aa12.5□□□□□ -0.41
CHMP2B-203ENST00000471660 CHL1O00533 1208 aa12.49□□□□□ -0.41
CHMP2B-203ENST00000471660 TOMM70O94826 608 aa12.49□□□□□ -0.41
CHMP2B-203ENST00000471660 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
CHMP2B-203ENST00000471660 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
CHMP2B-203ENST00000471660 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms