RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 USP17L3A6NCW0 530 aa26.48■■□□□ 1.83
SREBF1-210ENST00000471445 USP17L4A6NCW7 530 aa26.48■■□□□ 1.83
SREBF1-210ENST00000471445 CT47B1P0C2W7 299 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-210ENST00000471445 NBPF7P0C2Y1 421 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-210ENST00000471445 ZNF280AP59817 542 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-210ENST00000471445 CDC37L1Q7L3B6 337 aa26.48■■□□□ 1.83
SREBF1-210ENST00000471445 USP17L1Q7RTZ2 530 aa26.48■■□□□ 1.83
SREBF1-210ENST00000471445 CCDC57Q2TAC2 916 aa26.47■■□□□ 1.83
SREBF1-210ENST00000471445 DEFB115Q30KQ5 88 aa26.47■■□□□ 1.83
SREBF1-210ENST00000471445 SMC4Q9NTJ3 1288 aa26.46■■□□□ 1.83
SREBF1-210ENST00000471445 CELF2O95319 508 aaKnown RBP26.45■■□□□ 1.82
SREBF1-210ENST00000471445 KCNJ4P48050 445 aa26.45■■□□□ 1.82
SREBF1-210ENST00000471445 ZNF594Q96JF6 807 aaPredicted RBP26.45■■□□□ 1.82
SREBF1-210ENST00000471445 TLL2Q9Y6L7 1015 aa26.45■■□□□ 1.82
SREBF1-210ENST00000471445 RABL6Q3YEC7 729 aaPredicted RBP26.44■■□□□ 1.82
SREBF1-210ENST00000471445 DACT2Q5SW24 774 aa26.44■■□□□ 1.82
SREBF1-210ENST00000471445 RBM26Q5T8P6 1007 aaKnown RBP26.44■■□□□ 1.82
SREBF1-210ENST00000471445 C15orf52Q6ZUT6 534 aaKnown RBP26.44■■□□□ 1.82
SREBF1-210ENST00000471445 MYO3BQ8WXR4 1341 aa26.43■■□□□ 1.82
SREBF1-210ENST00000471445 TAF5LO75529 589 aa26.43■■□□□ 1.82
SREBF1-210ENST00000471445 TAF7LQ5H9L4 462 aa26.43■■□□□ 1.82
SREBF1-210ENST00000471445 STRIP1Q5VSL9 837 aa26.43■■□□□ 1.82
SREBF1-210ENST00000471445 PCNTO95613 3336 aa26.42■■□□□ 1.82
SREBF1-210ENST00000471445 SNAP23O00161 211 aa26.42■■□□□ 1.82
SREBF1-210ENST00000471445 USP17L8P0C7I0 530 aa26.42■■□□□ 1.82
SREBF1-210ENST00000471445 LDHAL6AQ6ZMR3 332 aa26.42■■□□□ 1.82
SREBF1-210ENST00000471445 HELBQ8NG08 1087 aaPredicted RBP26.42■■□□□ 1.82
SREBF1-210ENST00000471445 BICC1Q9H694 974 aaKnown RBP26.42■■□□□ 1.82
SREBF1-210ENST00000471445 GGA3Q9NZ52 723 aa26.42■■□□□ 1.82
SREBF1-210ENST00000471445 WDR33Q9C0J8 1336 aaKnown RBP26.41■■□□□ 1.82
SREBF1-210ENST00000471445 KRT26Q7Z3Y9 468 aa26.41■■□□□ 1.82
SREBF1-210ENST00000471445 USP48Q86UV5 1035 aa26.41■■□□□ 1.82
SREBF1-210ENST00000471445 CNNM1Q9NRU3 951 aa26.41■■□□□ 1.82
SREBF1-210ENST00000471445 ASTN2O75129 1339 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-210ENST00000471445 ARAP2Q8WZ64 1704 aa26.4■■□□□ 1.82
SREBF1-210ENST00000471445 BRPF1P55201 1214 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-210ENST00000471445 SAPCD2Q86UD0 394 aa26.4■■□□□ 1.82
SREBF1-210ENST00000471445 ANKRD44Q8N8A2 993 aa26.4■■□□□ 1.82
SREBF1-210ENST00000471445 DCPSQ96C86 337 aaKnown RBP26.4■■□□□ 1.82
SREBF1-210ENST00000471445 MXD3Q9BW11 206 aa26.4■■□□□ 1.82
SREBF1-210ENST00000471445 MYOZ2Q9NPC6 264 aa26.4■■□□□ 1.82
SREBF1-210ENST00000471445 ADM5C9JUS6 153 aa26.39■■□□□ 1.82
SREBF1-210ENST00000471445 FBXW7Q969H0 707 aa26.39■■□□□ 1.82
SREBF1-210ENST00000471445 USP44Q9H0E7 712 aa26.39■■□□□ 1.82
SREBF1-210ENST00000471445 ZNF408Q9H9D4 720 aa26.39■■□□□ 1.82
SREBF1-210ENST00000471445 CD209Q9NNX6 404 aa26.39■■□□□ 1.82
SREBF1-210ENST00000471445 ECM29Q5VYK3 1845 aa26.38■■□□□ 1.81
SREBF1-210ENST00000471445 ECE1P42892 770 aa26.38■■□□□ 1.81
SREBF1-210ENST00000471445 DIEXFQ68CQ4 756 aaKnown RBP26.38■■□□□ 1.81
SREBF1-210ENST00000471445 HHIPL1Q96JK4 782 aa26.38■■□□□ 1.81
SREBF1-210ENST00000471445 CAPNS2Q96L46 248 aa26.38■■□□□ 1.81
SREBF1-210ENST00000471445 COL13A1Q5TAT6 717 aaPredicted RBP26.37■■□□□ 1.81
SREBF1-210ENST00000471445 TTLL5Q6EMB2 1281 aa26.37■■□□□ 1.81
SREBF1-210ENST00000471445 DLK2Q6UY11 383 aa26.37■■□□□ 1.81
SREBF1-210ENST00000471445 MIER1Q8N108 512 aa26.37■■□□□ 1.81
SREBF1-210ENST00000471445 SCARF1Q14162 830 aa26.36■■□□□ 1.81
SREBF1-210ENST00000471445 CYP4F22Q6NT55 531 aa26.36■■□□□ 1.81
SREBF1-210ENST00000471445 PAXIP1Q6ZW49 1069 aaPredicted RBP26.36■■□□□ 1.81
SREBF1-210ENST00000471445 PUS3Q9BZE2 481 aaKnown RBP26.36■■□□□ 1.81
SREBF1-210ENST00000471445 PITPNM2Q9BZ72 1349 aa26.36■■□□□ 1.81
SREBF1-210ENST00000471445 GTF2IP78347 998 aa26.35■■□□□ 1.81
SREBF1-210ENST00000471445 ANGEL2Q5VTE6 544 aaKnown RBP26.35■■□□□ 1.81
SREBF1-210ENST00000471445 ZNF804AQ7Z570 1209 aa26.35■■□□□ 1.81
SREBF1-210ENST00000471445 SULF1Q8IWU6 871 aa26.35■■□□□ 1.81
SREBF1-210ENST00000471445 WBP1LQ9NX94 342 aa26.35■■□□□ 1.81
SREBF1-210ENST00000471445 NOB1Q9ULX3 412 aaKnown RBP26.35■■□□□ 1.81
SREBF1-210ENST00000471445 IL1R1P14778 569 aa26.34■■□□□ 1.81
SREBF1-210ENST00000471445 MMP14P50281 582 aa26.34■■□□□ 1.81
SREBF1-210ENST00000471445 RARSP54136 660 aaKnown RBP26.34■■□□□ 1.81
SREBF1-210ENST00000471445 RIPOR2Q9Y4F9 1068 aa26.34■■□□□ 1.81
SREBF1-210ENST00000471445 PAPPA2Q9BXP8 1791 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 FOXN1O15353 648 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 PLIN1O60240 522 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 UBE4AQ14139 1066 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 OGFOD1Q8N543 542 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 API5Q9BZZ5 524 aaKnown RBP26.33■■□□□ 1.81
SREBF1-210ENST00000471445 MROH5Q6ZUA9 1318 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 KIF16BQ96L93 1317 aa26.33■■□□□ 1.81
SREBF1-210ENST00000471445 KIAA0825Q8IV33 1275 aa26.31■■□□□ 1.8
SREBF1-210ENST00000471445 AIDAQ96BJ3 306 aa26.31■■□□□ 1.8
SREBF1-210ENST00000471445 CDCA5Q96FF9 252 aa26.31■■□□□ 1.8
SREBF1-210ENST00000471445 GBA2Q9HCG7 927 aaPredicted RBP26.31■■□□□ 1.8
SREBF1-210ENST00000471445 WNT10BO00744 389 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 MAP2K1Q02750 393 aaPredicted RBP26.3■■□□□ 1.8
SREBF1-210ENST00000471445 GRM1Q13255 1194 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 NBPF9Q3BBW0 867 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 LRRC24Q50LG9 513 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 CERS5Q8N5B7 392 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 HDAC9Q9UKV0 1011 aa26.3■■□□□ 1.8
SREBF1-210ENST00000471445 HUNKP57058 714 aa26.29■■□□□ 1.8
SREBF1-210ENST00000471445 FKBP1AP62942 108 aaKnown RBP26.29■■□□□ 1.8
SREBF1-210ENST00000471445 TNS4Q8IZW8 715 aa26.29■■□□□ 1.8
SREBF1-210ENST00000471445 VGLL2Q8N8G2 317 aa26.29■■□□□ 1.8
SREBF1-210ENST00000471445 SASH1O94885 1247 aa26.28■■□□□ 1.8
SREBF1-210ENST00000471445 KLHDC4Q8TBB5 520 aa26.28■■□□□ 1.8
SREBF1-210ENST00000471445 ZBED3Q96IU2 234 aaPredicted RBP26.28■■□□□ 1.8
SREBF1-210ENST00000471445 MYH13Q9UKX3 1938 aa26.27■■□□□ 1.8
SREBF1-210ENST00000471445 UBTFL1P0CB47 393 aaPredicted RBP26.27■■□□□ 1.8
SREBF1-210ENST00000471445 MAP2K2P36507 400 aa26.27■■□□□ 1.8
SREBF1-210ENST00000471445 RFX5P48382 616 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms