RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 STAP2Q9UGK3 403 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 KIF20AO95235 890 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 ZNF652Q9Y2D9 606 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
RRP1B-202ENST00000470886 BIN1O00499 593 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 RICTORQ6R327 1708 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 ZBTB43O43298 467 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 MYO1BO43795 1136 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 RAD21O60216 631 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 PAFAH1B1P43034 410 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 CAVIN4Q5BKX8 364 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 G2E3Q7L622 706 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 TSG101Q99816 390 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 STRN4Q9NRL3 753 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
RRP1B-202ENST00000470886 SYCP1Q15431 976 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
RRP1B-202ENST00000470886 AMPD3Q01432 767 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 TUBB2AQ13885 445 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 TUBB2BQ9BVA1 445 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 PTPDC1A2A3K4 754 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 KIF5BP33176 963 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
RRP1B-202ENST00000470886 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 IVLP07476 585 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
RRP1B-202ENST00000470886 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 CPS1P31327 1500 aa12.08□□□□□ -0.48
RRP1B-202ENST00000470886 SLC27A2O14975 620 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 NEFHP12036 1026 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 GABPB1Q06547 395 aaPredicted RBP12.07□□□□□ -0.48
RRP1B-202ENST00000470886 ZNF75DP51815 510 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 MICALCLQ6ZW33 695 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 DNAI1Q9UI46 699 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 CD163L1Q9NR16 1453 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
RRP1B-202ENST00000470886 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 NAA15Q9BXJ9 866 aaKnown RBP12.07□□□□□ -0.48
RRP1B-202ENST00000470886 LRRC27Q9C0I9 530 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 NCAPD2Q15021 1401 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 FAM177BA6PVY3 158 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 CCDC175P0C221 793 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 ODF2Q5BJF6 829 aa12.07□□□□□ -0.48
RRP1B-202ENST00000470886 FOXO3O43524 673 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 ANXA1P04083 346 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 V9GYY5 206 aaPredicted RBP12.06□□□□□ -0.48
RRP1B-202ENST00000470886 ELP1O95163 1332 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 PRC1O43663 620 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 CUL4AQ13619 759 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 LMBR1LQ6UX01 489 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 MICU3Q86XE3 530 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 TCEANC2Q96MN5 208 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 SLC26A6Q9BXS9 759 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 TRMT112Q9UI30 125 aaKnown RBP12.06□□□□□ -0.48
RRP1B-202ENST00000470886 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
RRP1B-202ENST00000470886 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
RRP1B-202ENST00000470886 GNAT2P19087 354 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 VPS36Q86VN1 386 aa12.06□□□□□ -0.48
RRP1B-202ENST00000470886 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
RRP1B-202ENST00000470886 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 MINDY4BA8MYZ0 360 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 POLR3GO15318 223 aaPredicted RBP12.05□□□□□ -0.48
RRP1B-202ENST00000470886 NLRP5P59047 1200 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 WTAPQ15007 396 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 LEO1Q8WVC0 666 aaPredicted RBP12.05□□□□□ -0.48
RRP1B-202ENST00000470886 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
RRP1B-202ENST00000470886 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
RRP1B-202ENST00000470886 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
RRP1B-202ENST00000470886 CTAGE15A4D2H0 777 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms