RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
TOP3B-215ENST00000470338 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 POLR2AP24928 1970 aaKnown RBP17.73■□□□□ 0.43
TOP3B-215ENST00000470338 USP17L3A6NCW0 530 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 USP17L4A6NCW7 530 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 H7C1D1 291 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-215ENST00000470338 USP17L1Q7RTZ2 530 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 MICALL2Q8IY33 904 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 MEIS3Q99687 375 aa17.73■□□□□ 0.43
TOP3B-215ENST00000470338 SHTN1A0MZ66 631 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 HIRAP54198 1017 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-215ENST00000470338 MAP1SQ66K74 1059 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-215ENST00000470338 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-215ENST00000470338 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 GMLQ99445 158 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
TOP3B-215ENST00000470338 PLIN1O60240 522 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 GNAI3P08754 354 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 UBE4AQ14139 1066 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 DNAJC5GQ8N7S2 189 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 CLUAP1Q96AJ1 413 aa17.71■□□□□ 0.43
TOP3B-215ENST00000470338 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
TOP3B-215ENST00000470338 TRPM7Q96QT4 1865 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 HTRA3P83110 453 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
TOP3B-215ENST00000470338 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 TRPM4Q8TD43 1214 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 ZC3H15Q8WU90 426 aaKnown RBP17.7■□□□□ 0.42
TOP3B-215ENST00000470338 CD209Q9NNX6 404 aa17.7■□□□□ 0.42
TOP3B-215ENST00000470338 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
TOP3B-215ENST00000470338 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
TOP3B-215ENST00000470338 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
TOP3B-215ENST00000470338 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
TOP3B-215ENST00000470338 IL1R1P14778 569 aa17.68■□□□□ 0.42
TOP3B-215ENST00000470338 TTLL5Q6EMB2 1281 aa17.68■□□□□ 0.42
TOP3B-215ENST00000470338 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
TOP3B-215ENST00000470338 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
TOP3B-215ENST00000470338 EYA2O00167 538 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 PDE8BO95263 885 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 EGFRP00533 1210 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 TBC1D10BQ4KMP7 808 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-215ENST00000470338 METTL24Q5JXM2 366 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 ATG9AQ7Z3C6 839 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
TOP3B-215ENST00000470338 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
TOP3B-215ENST00000470338 GTF2IP78347 998 aa17.66■□□□□ 0.42
TOP3B-215ENST00000470338 MTX1Q13505 466 aa17.66■□□□□ 0.42
TOP3B-215ENST00000470338 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
TOP3B-215ENST00000470338 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
TOP3B-215ENST00000470338 MXD3Q9BW11 206 aa17.66■□□□□ 0.42
TOP3B-215ENST00000470338 CIAO1O76071 339 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 GNAI2P04899 355 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 RLBP1P12271 317 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 MMP14P50281 582 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 COPRSQ9NQ92 184 aa17.65■□□□□ 0.42
TOP3B-215ENST00000470338 TMEM88BA6NKF7 163 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 FGFR2P21802 821 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 HIBADHP31937 336 aaKnown RBP17.64■□□□□ 0.41
TOP3B-215ENST00000470338 GYG1P46976 350 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 RBM26Q5T8P6 1007 aaKnown RBP17.64■□□□□ 0.41
TOP3B-215ENST00000470338 FBXO33Q7Z6M2 555 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
TOP3B-215ENST00000470338 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
TOP3B-215ENST00000470338 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
TOP3B-215ENST00000470338 SASH1O94885 1247 aa17.63■□□□□ 0.41
TOP3B-215ENST00000470338 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
TOP3B-215ENST00000470338 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
TOP3B-215ENST00000470338 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
TOP3B-215ENST00000470338 TRAF5O00463 557 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 ZBTB7BO15156 539 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 PUM3Q15397 648 aaKnown RBP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 OGFOD1Q8N543 542 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 CERS5Q8N5B7 392 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 GLIS2Q9BZE0 524 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 SIL1Q9H173 461 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
TOP3B-215ENST00000470338 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
TOP3B-215ENST00000470338 SCARF1Q14162 830 aa17.61■□□□□ 0.41
TOP3B-215ENST00000470338 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
TOP3B-215ENST00000470338 MS4A1P11836 297 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 CAVIN4Q5BKX8 364 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 CST9Q5W186 159 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 USP48Q86UV5 1035 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 LPIN2Q92539 896 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 DCPSQ96C86 337 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms