RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	GALNT12	Q8IXK2	581 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	CNTNAP3B	Q96NU0	1288 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	KRTAP3-3	Q9BYR6	98 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	KRTAP3-2	Q9BYR7	98 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	CNTNAP3	Q9BZ76	1288 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	TMEM260	Q9NX78	707 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	PRKAG3	Q9UGI9	489 aa		6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	AQR	O60306	1485 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
GCFC2-205	ENST00000470197	ENC1	O14682	589 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	LIAT1	Q6ZQX7	453 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197		A0A1W2PP55	124 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	PLEKHD1	A6NEE1	506 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	VEGFB	P49765	207 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	CBX2	Q14781	532 aa	Predicted RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	ODR4	Q5SWX8	454 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	MRM1	Q6IN84	353 aa	Known RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	PRPF38A	Q8NAV1	312 aa	Known RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	ZNF608	Q9ULD9	1512 aa	Predicted RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	POTEC	B2RU33	542 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	DHX9	Q08211	1270 aa	Known RBP	6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	DDR2	Q16832	855 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	BTLA	Q7Z6A9	289 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	CHMP3	Q9Y3E7	222 aa		6.59	□□□□□ -1.35
GCFC2-205	ENST00000470197	S100B	P04271	92 aa	Predicted RBP	6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	PCDHB5	Q9Y5E4	795 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	GRIA4	P48058	902 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	SEZ6	Q53EL9	994 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	UBR7	Q8N806	425 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	RHPN1	Q8TCX5	695 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	NT5C1A	Q9BXI3	368 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	NIFK	Q9BYG3	293 aa	Known RBP	6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	MAPK8IP1	Q9UQF2	711 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	ADAMTSL4	Q6UY14	1074 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197		Q6ZVU0	165 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	SUV39H2	Q9H5I1	410 aa		6.58	□□□□□ -1.36
GCFC2-205	ENST00000470197	CAMK2G	Q13555	558 aa	Predicted RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	ANKRD24	Q8TF21	1146 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	CHST12	Q9NRB3	414 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	AKAP2	Q9Y2D5	859 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	CCDC88B	A6NC98	1476 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	F13A1	P00488	732 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	PDE12	Q6L8Q7	609 aa	Known RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	TCF12	Q99081	682 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	ANTXR1	Q9H6X2	564 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	TOP2A	P11388	1531 aa	Known RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	PCSK2	P16519	638 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	FAM50A	Q14320	339 aa	Known RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	LRRC69	Q6ZNQ3	347 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	ZCRB1	Q8TBF4	217 aa	Known RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	ANKIB1	Q9P2G1	1089 aa		6.57	□□□□□ -1.36
GCFC2-205	ENST00000470197	SOGA1	O94964	1423 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	APOBR	Q0VD83	1088 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	MPRIP	Q6WCQ1	1025 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	APPBP2	Q92624	585 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	STAC3	Q96MF2	364 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	SRRT	Q9BXP5	876 aa	Known RBP	6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	ABCC8	Q09428	1581 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	GSTT1	P30711	240 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	PTGIR	P43119	386 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	FAAP100	Q0VG06	881 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	TMEM214	Q6NUQ4	689 aa	Known RBP	6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	RHBDD1	Q8TEB9	315 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	XYLB	O75191	536 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	GJB6	O95452	261 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	LIG3	P49916	1009 aa		6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	INSM2	Q96T92	566 aa	Predicted RBP	6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	TTBK1	Q5TCY1	1321 aa	Predicted RBP	6.56	□□□□□ -1.36
GCFC2-205	ENST00000470197	ARHGEF11	O15085	1522 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	ZNF157	P51786	506 aa	Predicted RBP	6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	CCDC146	Q8IYE0	955 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	CPLX3	Q8WVH0	158 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	TARS	P26639	723 aa	Known RBP	6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	ITGAE	P38570	1179 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	NR5A1	Q13285	461 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	NNT	Q13423	1086 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	MAP9	Q49MG5	647 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	BRDT	Q58F21	947 aa	Predicted RBP	6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	GRIP2	Q9C0E4	1043 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	ABI2	Q9NYB9	513 aa	Predicted RBP	6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	EID1	Q9Y6B2	187 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	PTCH2	Q9Y6C5	1203 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	TOPBP1	Q92547	1522 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	GIPC1	O14908	333 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	PDPK1	O15530	556 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	TYRO3	Q06418	890 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	TRPM4	Q8TD43	1214 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	SRCIN1	Q9C0H9	1055 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	EHD4	Q9H223	541 aa		6.55	□□□□□ -1.36
GCFC2-205	ENST00000470197	SPRED3	Q2MJR0	410 aa		6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	FERMT3	Q86UX7	667 aa		6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	ASMTL	O95671	621 aa		6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	VIL1	P09327	827 aa	Known RBP	6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	CLC	Q05315	142 aa		6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	LARP1B	Q659C4	914 aa	Known RBP	6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	FAM196A	Q6ZSG2	479 aa		6.54	□□□□□ -1.36
GCFC2-205	ENST00000470197	KRT25	Q7Z3Z0	450 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms