RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 CFHR5Q9BXR6 569 aa11□□□□□ -0.65
LSM2-210ENST00000470086 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
LSM2-210ENST00000470086 PCDHB8Q9UN66 801 aa11□□□□□ -0.65
LSM2-210ENST00000470086 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
LSM2-210ENST00000470086 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
LSM2-210ENST00000470086 IGF2BP3O00425 579 aaKnown RBP eCLIP10.99□□□□□ -0.65
LSM2-210ENST00000470086 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
LSM2-210ENST00000470086 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
LSM2-210ENST00000470086 SCARF1Q14162 830 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 PDIA6Q15084 440 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 SLC10A5Q5PT55 438 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 KIF6Q6ZMV9 814 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
LSM2-210ENST00000470086 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
LSM2-210ENST00000470086 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
LSM2-210ENST00000470086 WTIPA6NIX2 430 aaPredicted RBP10.97□□□□□ -0.65
LSM2-210ENST00000470086 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
LSM2-210ENST00000470086 RPS12P25398 132 aaKnown RBP10.97□□□□□ -0.65
LSM2-210ENST00000470086 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
LSM2-210ENST00000470086 PTPN12Q05209 780 aaKnown RBP10.97□□□□□ -0.65
LSM2-210ENST00000470086 PRKG1Q13976 671 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 NBPF9Q3BBW0 867 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 NLRP10Q86W26 655 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 SLC17A8Q8NDX2 589 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 GMLQ99445 158 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
LSM2-210ENST00000470086 GJA5P36382 358 aa10.96□□□□□ -0.65
LSM2-210ENST00000470086 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
LSM2-210ENST00000470086 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
LSM2-210ENST00000470086 UTP14AQ9BVJ6 771 aaKnown RBP10.96□□□□□ -0.65
LSM2-210ENST00000470086 PITPNM2Q9BZ72 1349 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 BBOX1O75936 387 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
LSM2-210ENST00000470086 FKBP1BP68106 108 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 PARP10Q53GL7 1025 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 LRCH3Q96II8 777 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 MYOZ2Q9NPC6 264 aa10.95□□□□□ -0.66
LSM2-210ENST00000470086 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
LSM2-210ENST00000470086 AOX1Q06278 1338 aa10.94□□□□□ -0.66
LSM2-210ENST00000470086 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
LSM2-210ENST00000470086 SASH1O94885 1247 aa10.94□□□□□ -0.66
LSM2-210ENST00000470086 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
LSM2-210ENST00000470086 RSBN1LQ6PCB5 846 aaPredicted RBP10.94□□□□□ -0.66
LSM2-210ENST00000470086 DDX46Q7L014 1031 aaKnown RBP10.94□□□□□ -0.66
LSM2-210ENST00000470086 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
LSM2-210ENST00000470086 PTCH2Q9Y6C5 1203 aa10.94□□□□□ -0.66
LSM2-210ENST00000470086 C7P10643 843 aa10.93□□□□□ -0.66
LSM2-210ENST00000470086 CRHR2Q13324 411 aa10.93□□□□□ -0.66
LSM2-210ENST00000470086 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.66
LSM2-210ENST00000470086 SREBF2Q12772 1141 aa10.92□□□□□ -0.66
LSM2-210ENST00000470086 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
LSM2-210ENST00000470086 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
LSM2-210ENST00000470086 INTS3Q68E01 1043 aaKnown RBP10.92□□□□□ -0.66
LSM2-210ENST00000470086 PCDHAC2Q9Y5I4 1007 aa10.92□□□□□ -0.66
LSM2-210ENST00000470086 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
LSM2-210ENST00000470086 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
LSM2-210ENST00000470086 PTPN18Q99952 460 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 ARHGAP39Q9C0H5 1083 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 TMX4Q9H1E5 349 aaPredicted RBP10.91□□□□□ -0.66
LSM2-210ENST00000470086 SEC31BQ9NQW1 1179 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
LSM2-210ENST00000470086 SH3TC1Q8TE82 1336 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 WNT10BO00744 389 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 UFL1O94874 794 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 PSEN1P49768 467 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 KRT24Q2M2I5 525 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
LSM2-210ENST00000470086 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
LSM2-210ENST00000470086 FAM89AQ96GI7 184 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 WNK4Q96J92 1243 aa10.9□□□□□ -0.66
LSM2-210ENST00000470086 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
LSM2-210ENST00000470086 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
LSM2-210ENST00000470086 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
LSM2-210ENST00000470086 IER5LQ5T953 404 aa10.89□□□□□ -0.67
LSM2-210ENST00000470086 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
LSM2-210ENST00000470086 XAGE3Q8WTP9 111 aa10.89□□□□□ -0.67
LSM2-210ENST00000470086 COL25A1Q9BXS0 654 aaPredicted RBP10.89□□□□□ -0.67
LSM2-210ENST00000470086 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
LSM2-210ENST00000470086 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 PTPRFP10586 1907 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 AK9Q5TCS8 1911 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 MTFR1Q15390 333 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 COPS6Q7L5N1 327 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 EFCC1Q9HA90 598 aa10.88□□□□□ -0.67
LSM2-210ENST00000470086 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms