RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
LSM2-209ENST00000470083 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
LSM2-209ENST00000470083 SEC31BQ9NQW1 1179 aa15.72■□□□□ 0.11
LSM2-209ENST00000470083 ANGEL1Q9UNK9 670 aaKnown RBP15.72■□□□□ 0.11
LSM2-209ENST00000470083 COL6A3P12111 3177 aa15.72■□□□□ 0.11
LSM2-209ENST00000470083 XDHP47989 1333 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 MMP14P50281 582 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 TRIM28Q13263 835 aaKnown RBP15.71■□□□□ 0.11
LSM2-209ENST00000470083 CRHR2Q13324 411 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
LSM2-209ENST00000470083 MYO3BQ8WXR4 1341 aa15.7■□□□□ 0.1
LSM2-209ENST00000470083 SASH1O94885 1247 aa15.7■□□□□ 0.1
LSM2-209ENST00000470083 MAP3K11Q16584 847 aa15.7■□□□□ 0.1
LSM2-209ENST00000470083 WNK4Q96J92 1243 aa15.7■□□□□ 0.1
LSM2-209ENST00000470083 CHPF2Q9P2E5 772 aa15.7■□□□□ 0.1
LSM2-209ENST00000470083 MAPK8IP3Q9UPT6 1336 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
LSM2-209ENST00000470083 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 CAP1Q01518 475 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 SP3Q02447 781 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 CHRDL2Q6WN34 429 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 NBPF11Q86T75 865 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 MXD3Q9BW11 206 aa15.69■□□□□ 0.1
LSM2-209ENST00000470083 PSME4Q14997 1843 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 COL1A1P02452 1464 aaPredicted RBP15.68■□□□□ 0.1
LSM2-209ENST00000470083 UNCXA6NJT0 531 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 SLC4A8Q2Y0W8 1093 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 CCDC152Q4G0S7 254 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 ZBTB38Q8NAP3 1195 aaPredicted RBP15.68■□□□□ 0.1
LSM2-209ENST00000470083 CLMNQ96JQ2 1002 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 FZD1Q9UP38 647 aa15.68■□□□□ 0.1
LSM2-209ENST00000470083 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
LSM2-209ENST00000470083 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
LSM2-209ENST00000470083 RBM27Q9P2N5 1060 aaKnown RBP15.67■□□□□ 0.1
LSM2-209ENST00000470083 LAMA3Q16787 3333 aa15.66■□□□□ 0.1
LSM2-209ENST00000470083 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
LSM2-209ENST00000470083 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
LSM2-209ENST00000470083 ANKRD18AQ8IVF6 992 aa15.66■□□□□ 0.1
LSM2-209ENST00000470083 ZBED3Q96IU2 234 aaPredicted RBP15.66■□□□□ 0.1
LSM2-209ENST00000470083 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
LSM2-209ENST00000470083 PTCH2Q9Y6C5 1203 aa15.66■□□□□ 0.1
LSM2-209ENST00000470083 ARHGEF6Q15052 776 aa15.65■□□□□ 0.1
LSM2-209ENST00000470083 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
LSM2-209ENST00000470083 FBXW7Q969H0 707 aa15.65■□□□□ 0.1
LSM2-209ENST00000470083 PTPN18Q99952 460 aa15.65■□□□□ 0.1
LSM2-209ENST00000470083 SSC5DA1L4H1 1573 aa15.64■□□□□ 0.09
LSM2-209ENST00000470083 TESPA1A2RU30 521 aaPredicted RBP15.64■□□□□ 0.09
LSM2-209ENST00000470083 WTIPA6NIX2 430 aaPredicted RBP15.64■□□□□ 0.09
LSM2-209ENST00000470083 GJA5P36382 358 aa15.64■□□□□ 0.09
LSM2-209ENST00000470083 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
LSM2-209ENST00000470083 HDGFL1Q5TGJ6 251 aa15.64■□□□□ 0.09
LSM2-209ENST00000470083 COA1Q9GZY4 146 aa15.64■□□□□ 0.09
LSM2-209ENST00000470083 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
LSM2-209ENST00000470083 DBF4Q9UBU7 674 aaPredicted RBP15.64■□□□□ 0.09
LSM2-209ENST00000470083 PPP2R3BQ9Y5P8 575 aa15.64■□□□□ 0.09
LSM2-209ENST00000470083 PDE8AO60658 829 aa15.63■□□□□ 0.09
LSM2-209ENST00000470083 HOXB7P09629 217 aa15.63■□□□□ 0.09
LSM2-209ENST00000470083 RIPK4P57078 832 aa15.63■□□□□ 0.09
LSM2-209ENST00000470083 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
LSM2-209ENST00000470083 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
LSM2-209ENST00000470083 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
LSM2-209ENST00000470083 PRO3102Q9H379 93 aa15.62■□□□□ 0.09
LSM2-209ENST00000470083 HYPKQ9NX55 129 aa15.62■□□□□ 0.09
LSM2-209ENST00000470083 CHL1O00533 1208 aa15.61■□□□□ 0.09
LSM2-209ENST00000470083 PCCAP05165 728 aaPredicted RBP15.61■□□□□ 0.09
LSM2-209ENST00000470083 IREB2P48200 963 aaKnown RBP15.61■□□□□ 0.09
LSM2-209ENST00000470083 SUPT20HL1Q3ZLR7 823 aa15.61■□□□□ 0.09
LSM2-209ENST00000470083 TTLL5Q6EMB2 1281 aa15.61■□□□□ 0.09
LSM2-209ENST00000470083 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
LSM2-209ENST00000470083 LAMB1P07942 1786 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 MYCP01106 439 aaPredicted RBP15.6■□□□□ 0.09
LSM2-209ENST00000470083 CCT4P50991 539 aaKnown RBP15.6■□□□□ 0.09
LSM2-209ENST00000470083 DLGAP5Q15398 846 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 DPF3Q92784 378 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
LSM2-209ENST00000470083 MINPP1Q9UNW1 487 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 ZNF804BA4D1E1 1349 aa15.6■□□□□ 0.09
LSM2-209ENST00000470083 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
LSM2-209ENST00000470083 RIC3Q7Z5B4 369 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 TXNRD3Q86VQ6 643 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 MTMR14Q8NCE2 650 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 SH3TC2Q8TF17 1288 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 MS4A4AQ96JQ5 239 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 ZFYVE28Q9HCC9 887 aa15.59■□□□□ 0.09
LSM2-209ENST00000470083 USP2O75604 605 aaPredicted RBP15.58■□□□□ 0.08
LSM2-209ENST00000470083 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
LSM2-209ENST00000470083 TAF1CQ15572 869 aaPredicted RBP15.58■□□□□ 0.08
LSM2-209ENST00000470083 SHISA4Q96DD7 197 aa15.58■□□□□ 0.08
LSM2-209ENST00000470083 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
LSM2-209ENST00000470083 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
LSM2-209ENST00000470083 CTSWP56202 376 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 242.1 ms