RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CHRNDQ07001 517 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 EPHA10Q5JZY3 1008 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
COL9A3-208ENST00000469802 DLK2Q6UY11 383 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 TNS4Q8IZW8 715 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 COA1Q9GZY4 146 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 GGA3Q9NZ52 723 aa20.7■□□□□ 0.9
COL9A3-208ENST00000469802 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 E9PSI1 815 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 CTCFP49711 727 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-208ENST00000469802 MAP2K1Q02750 393 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-208ENST00000469802 DACT2Q5SW24 774 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 ZNF408Q9H9D4 720 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 PRDM10Q9NQV6 1147 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 ASTN2O75129 1339 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-208ENST00000469802 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
COL9A3-208ENST00000469802 USP17L8P0C7I0 530 aa20.68■□□□□ 0.9
COL9A3-208ENST00000469802 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
COL9A3-208ENST00000469802 DCPSQ96C86 337 aaKnown RBP20.68■□□□□ 0.9
COL9A3-208ENST00000469802 PAPPA2Q9BXP8 1791 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 SLFN5Q08AF3 891 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 STRIP1Q5VSL9 837 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 LMBR1LQ6UX01 489 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-208ENST00000469802 MRPL50Q8N5N7 158 aaKnown RBP20.67■□□□□ 0.9
COL9A3-208ENST00000469802 SRCIN1Q9C0H9 1055 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 MYOZ2Q9NPC6 264 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 UTYO14607 1347 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 MYO3BQ8WXR4 1341 aa20.67■□□□□ 0.9
COL9A3-208ENST00000469802 MAP2K2P36507 400 aa20.66■□□□□ 0.9
COL9A3-208ENST00000469802 SLC4A10Q6U841 1118 aa20.66■□□□□ 0.9
COL9A3-208ENST00000469802 C15orf52Q6ZUT6 534 aaKnown RBP20.66■□□□□ 0.9
COL9A3-208ENST00000469802 PITPNM2Q9BZ72 1349 aa20.66■□□□□ 0.9
COL9A3-208ENST00000469802 PTPRCP08575 1304 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 AOC2O75106 756 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 HSPA8P11142 646 aaKnown RBP20.65■□□□□ 0.9
COL9A3-208ENST00000469802 ANGEL2Q5VTE6 544 aaKnown RBP20.65■□□□□ 0.9
COL9A3-208ENST00000469802 SULF1Q8IWU6 871 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 KAZALD1Q96I82 304 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 C9orf78Q9NZ63 289 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-208ENST00000469802 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
COL9A3-208ENST00000469802 GRM1Q13255 1194 aa20.64■□□□□ 0.89
COL9A3-208ENST00000469802 SCARF1Q14162 830 aa20.64■□□□□ 0.89
COL9A3-208ENST00000469802 GBA2Q9HCG7 927 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-208ENST00000469802 SNAP23O00161 211 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 TAF5LO75529 589 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 NBPF7P0C2Y1 421 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-208ENST00000469802 KCNJ4P48050 445 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 LBX1P52954 281 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 HUNKP57058 714 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 SUCLG2Q96I99 432 aa20.63■□□□□ 0.89
COL9A3-208ENST00000469802 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
COL9A3-208ENST00000469802 MMP14P50281 582 aa20.62■□□□□ 0.89
COL9A3-208ENST00000469802 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
COL9A3-208ENST00000469802 TRMT2AQ8IZ69 625 aaKnown RBP20.62■□□□□ 0.89
COL9A3-208ENST00000469802 HELBQ8NG08 1087 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-208ENST00000469802 CDCA5Q96FF9 252 aa20.62■□□□□ 0.89
COL9A3-208ENST00000469802 ZNF594Q96JF6 807 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-208ENST00000469802 CD209Q9NNX6 404 aa20.62■□□□□ 0.89
COL9A3-208ENST00000469802 BRPF1P55201 1214 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-208ENST00000469802 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-208ENST00000469802 TTLL5Q6EMB2 1281 aa20.61■□□□□ 0.89
COL9A3-208ENST00000469802 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
COL9A3-208ENST00000469802 AKAP11Q9UKA4 1901 aa20.61■□□□□ 0.89
COL9A3-208ENST00000469802 NBPF9Q3BBW0 867 aa20.6■□□□□ 0.89
COL9A3-208ENST00000469802 LDHAL6AQ6ZMR3 332 aa20.6■□□□□ 0.89
COL9A3-208ENST00000469802 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
COL9A3-208ENST00000469802 C2orf69Q8N8R5 385 aa20.6■□□□□ 0.89
COL9A3-208ENST00000469802 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
COL9A3-208ENST00000469802 FAM155AB1AL88 458 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-208ENST00000469802 WNT10BO00744 389 aa20.59■□□□□ 0.89
COL9A3-208ENST00000469802 IL1R1P14778 569 aa20.59■□□□□ 0.89
COL9A3-208ENST00000469802 GTF2IP78347 998 aa20.59■□□□□ 0.89
COL9A3-208ENST00000469802 NOGQ13253 232 aa20.59■□□□□ 0.89
COL9A3-208ENST00000469802 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
COL9A3-208ENST00000469802 ZBED3Q96IU2 234 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-208ENST00000469802 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.89
COL9A3-208ENST00000469802 RGMBQ6NW40 437 aa20.58■□□□□ 0.89
COL9A3-208ENST00000469802 CERS5Q8N5B7 392 aa20.58■□□□□ 0.89
COL9A3-208ENST00000469802 ANKRD44Q8N8A2 993 aa20.58■□□□□ 0.89
COL9A3-208ENST00000469802 BICC1Q9H694 974 aaKnown RBP20.58■□□□□ 0.89
COL9A3-208ENST00000469802 CNNM1Q9NRU3 951 aa20.58■□□□□ 0.89
COL9A3-208ENST00000469802 ZNF804AQ7Z570 1209 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 KIAA0825Q8IV33 1275 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 ZIC5Q96T25 663 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 BEGAINQ9BUH8 593 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 MYH13Q9UKX3 1938 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 LAMB1P07942 1786 aa20.57■□□□□ 0.88
COL9A3-208ENST00000469802 CASP8AP2Q9UKL3 1982 aa20.56■□□□□ 0.88
COL9A3-208ENST00000469802 CA12O43570 354 aa20.56■□□□□ 0.88
COL9A3-208ENST00000469802 SASH1O94885 1247 aa20.56■□□□□ 0.88
COL9A3-208ENST00000469802 FKBP1BP68106 108 aa20.56■□□□□ 0.88
COL9A3-208ENST00000469802 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
COL9A3-208ENST00000469802 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
COL9A3-208ENST00000469802 FKBP1AP62942 108 aaKnown RBP20.55■□□□□ 0.88
COL9A3-208ENST00000469802 PUS3Q9BZE2 481 aaKnown RBP20.55■□□□□ 0.88
COL9A3-208ENST00000469802 USP44Q9H0E7 712 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms