RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 LDHDQ86WU2 507 aa14.62□□□□□ -0.07
MCF2L-222ENST00000469558 DZIP1LQ8IYY4 767 aaKnown RBP14.62□□□□□ -0.07
MCF2L-222ENST00000469558 TRPM4Q8TD43 1214 aa14.62□□□□□ -0.07
MCF2L-222ENST00000469558 COA1Q9GZY4 146 aa14.62□□□□□ -0.07
MCF2L-222ENST00000469558 ITGBL1O95965 494 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-222ENST00000469558 GNAI3P08754 354 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 DACT2Q5SW24 774 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 PANK1Q8TE04 598 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 DPF2Q92785 391 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 MXD3Q9BW11 206 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 RCAN3Q9UKA8 241 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 PA2G4Q9UQ80 394 aaKnown RBP14.61□□□□□ -0.07
MCF2L-222ENST00000469558 MROH5Q6ZUA9 1318 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 PASKQ96RG2 1323 aa14.61□□□□□ -0.07
MCF2L-222ENST00000469558 EYA2O00167 538 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 ZBTB7BO15156 539 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-222ENST00000469558 PLIN1O60240 522 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 FGFR2P21802 821 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 LMOD1P29536 600 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-222ENST00000469558 EAPPQ56P03 285 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-222ENST00000469558 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-222ENST00000469558 MICALL2Q8IY33 904 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 CD209Q9NNX6 404 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 ADARB2Q9NS39 739 aaKnown RBP14.6□□□□□ -0.07
MCF2L-222ENST00000469558 ARAP2Q8WZ64 1704 aa14.6□□□□□ -0.07
MCF2L-222ENST00000469558 PNMA6EA0A0J9YXQ4 647 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 USP17L3A6NCW0 530 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 USP17L4A6NCW7 530 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 IL1R1P14778 569 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 RPS12P25398 132 aaKnown RBP14.59□□□□□ -0.07
MCF2L-222ENST00000469558 UBE4AQ14139 1066 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 USP50Q70EL3 339 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-222ENST00000469558 USP17L1Q7RTZ2 530 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-222ENST00000469558 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
MCF2L-222ENST00000469558 CNOT7Q9UIV1 285 aaKnown RBP14.59□□□□□ -0.07
MCF2L-222ENST00000469558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-222ENST00000469558 CIAO1O76071 339 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 PDE8BO95263 885 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 GNAI2P04899 355 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 KCNJ4P48050 445 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 ZNF280AP59817 542 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-222ENST00000469558 HTRA3P83110 453 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 STRIP1Q5VSL9 837 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-222ENST00000469558 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 FAM84BQ96KN1 310 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-222ENST00000469558 PGAP2Q9UHJ9 254 aa14.58□□□□□ -0.08
MCF2L-222ENST00000469558 GYG1P46976 350 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 FMR1Q06787 632 aaKnown RBP eCLIP14.57□□□□□ -0.08
MCF2L-222ENST00000469558 METTL24Q5JXM2 366 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
MCF2L-222ENST00000469558 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 SIL1Q9H173 461 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 C1orf115Q9H7X2 142 aa14.57□□□□□ -0.08
MCF2L-222ENST00000469558 COL1A1P02452 1464 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-222ENST00000469558 G3V3G9 751 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 SRGAP3O43295 1099 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 POLA2Q14181 598 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 FBXO33Q7Z6M2 555 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 TDRD7Q8NHU6 1098 aaKnown RBP14.56□□□□□ -0.08
MCF2L-222ENST00000469558 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 HDAC5Q9UQL6 1122 aa14.56□□□□□ -0.08
MCF2L-222ENST00000469558 ASTN2O75129 1339 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-222ENST00000469558 APLP1P51693 650 aa14.55□□□□□ -0.08
MCF2L-222ENST00000469558 GTF2IP78347 998 aa14.55□□□□□ -0.08
MCF2L-222ENST00000469558 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-222ENST00000469558 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
MCF2L-222ENST00000469558 DNAJC5GQ8N7S2 189 aa14.55□□□□□ -0.08
MCF2L-222ENST00000469558 YTHDC1Q96MU7 727 aaKnown RBP14.55□□□□□ -0.08
MCF2L-222ENST00000469558 FAM205AQ6ZU69 1335 aa14.55□□□□□ -0.08
MCF2L-222ENST00000469558 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
MCF2L-222ENST00000469558 PUM3Q15397 648 aaKnown RBP14.54□□□□□ -0.08
MCF2L-222ENST00000469558 TTLL5Q6EMB2 1281 aa14.54□□□□□ -0.08
MCF2L-222ENST00000469558 ZNF804AQ7Z570 1209 aa14.54□□□□□ -0.08
MCF2L-222ENST00000469558 SSH3Q8TE77 659 aa14.54□□□□□ -0.08
MCF2L-222ENST00000469558 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
MCF2L-222ENST00000469558 H7C1D1 291 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 TRAF5O00463 557 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 USP17L8P0C7I0 530 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 HIBADHP31937 336 aaKnown RBP14.53□□□□□ -0.08
MCF2L-222ENST00000469558 IL15P40933 162 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-222ENST00000469558 BCAMP50895 628 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 KIF4BQ2VIQ3 1234 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 DLK2Q6UY11 383 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 COG6Q9Y2V7 657 aa14.53□□□□□ -0.08
MCF2L-222ENST00000469558 MYO3BQ8WXR4 1341 aa14.52□□□□□ -0.08
MCF2L-222ENST00000469558 SASH1O94885 1247 aa14.52□□□□□ -0.09
MCF2L-222ENST00000469558 ATP8B2P98198 1209 aa14.52□□□□□ -0.09
MCF2L-222ENST00000469558 GRIK5Q16478 980 aa14.52□□□□□ -0.09
MCF2L-222ENST00000469558 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
MCF2L-222ENST00000469558 ZC3H15Q8WU90 426 aaKnown RBP14.52□□□□□ -0.09
MCF2L-222ENST00000469558 LPIN2Q92539 896 aa14.52□□□□□ -0.09
MCF2L-222ENST00000469558 ZBED3Q96IU2 234 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-222ENST00000469558 GLIS2Q9BZE0 524 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms