RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 H7C1W4 665 aa15.76■□□□□ 0.11
HDAC3-204ENST00000469207 KLRK1P26718 216 aa15.76■□□□□ 0.11
HDAC3-204ENST00000469207 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
HDAC3-204ENST00000469207 CDC5LQ99459 802 aaKnown RBP15.76■□□□□ 0.11
HDAC3-204ENST00000469207 SNAP23O00161 211 aa15.75■□□□□ 0.11
HDAC3-204ENST00000469207 SLC10A3P09131 477 aa15.75■□□□□ 0.11
HDAC3-204ENST00000469207 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
HDAC3-204ENST00000469207 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
HDAC3-204ENST00000469207 DACT2Q5SW24 774 aa15.75■□□□□ 0.11
HDAC3-204ENST00000469207 STK31Q9BXU1 1019 aa15.75■□□□□ 0.11
HDAC3-204ENST00000469207 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
HDAC3-204ENST00000469207 RGS19P49795 217 aa15.74■□□□□ 0.11
HDAC3-204ENST00000469207 MLLT1Q03111 559 aaPredicted RBP15.74■□□□□ 0.11
HDAC3-204ENST00000469207 ITGA6P23229 1130 aa15.73■□□□□ 0.11
HDAC3-204ENST00000469207 CASP7P55210 303 aa15.73■□□□□ 0.11
HDAC3-204ENST00000469207 GCKRQ14397 625 aa15.73■□□□□ 0.11
HDAC3-204ENST00000469207 RASAL3Q86YV0 1011 aa15.73■□□□□ 0.11
HDAC3-204ENST00000469207 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
HDAC3-204ENST00000469207 WNT10BO00744 389 aa15.72■□□□□ 0.11
HDAC3-204ENST00000469207 FLIIQ13045 1269 aa15.72■□□□□ 0.11
HDAC3-204ENST00000469207 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
HDAC3-204ENST00000469207 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
HDAC3-204ENST00000469207 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
HDAC3-204ENST00000469207 SASH1O94885 1247 aa15.71■□□□□ 0.11
HDAC3-204ENST00000469207 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
HDAC3-204ENST00000469207 TTLL5Q6EMB2 1281 aa15.71■□□□□ 0.11
HDAC3-204ENST00000469207 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.11
HDAC3-204ENST00000469207 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
HDAC3-204ENST00000469207 PSME4Q14997 1843 aa15.71■□□□□ 0.1
HDAC3-204ENST00000469207 ZNF804BA4D1E1 1349 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 ZNF609O15014 1411 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 VAMP4O75379 141 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 TAF5LO75529 589 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 CSF1RP07333 972 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 GTF2IP78347 998 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
HDAC3-204ENST00000469207 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
HDAC3-204ENST00000469207 PRKG1Q13976 671 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 STRIP1Q5VSL9 837 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 KIAA0825Q8IV33 1275 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 COA1Q9GZY4 146 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 SAGE1Q9NXZ1 904 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
HDAC3-204ENST00000469207 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 F6X3S4 739 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 CHRNDQ07001 517 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 TTLL12Q14166 644 aaPredicted RBP15.69■□□□□ 0.1
HDAC3-204ENST00000469207 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 MPHOSPH8Q99549 860 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 PLA2G12BQ9BX93 195 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
HDAC3-204ENST00000469207 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
HDAC3-204ENST00000469207 PCDHAC2Q9Y5I4 1007 aa15.69■□□□□ 0.1
HDAC3-204ENST00000469207 FANCIQ9NVI1 1328 aa15.68■□□□□ 0.1
HDAC3-204ENST00000469207 MYH3P11055 1940 aa15.68■□□□□ 0.1
HDAC3-204ENST00000469207 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
HDAC3-204ENST00000469207 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
HDAC3-204ENST00000469207 SOX10P56693 466 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 FKBP1BP68106 108 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 FOXO4P98177 505 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 LINS1Q8NG48 757 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 IL16Q14005 1332 aa15.67■□□□□ 0.1
HDAC3-204ENST00000469207 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 ZNF646O15015 1829 aaPredicted RBP15.66■□□□□ 0.1
HDAC3-204ENST00000469207 KCNJ4P48050 445 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 PTPN12Q05209 780 aaKnown RBP15.66■□□□□ 0.1
HDAC3-204ENST00000469207 EPHA10Q5JZY3 1008 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 CERS5Q8N5B7 392 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
HDAC3-204ENST00000469207 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
HDAC3-204ENST00000469207 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
HDAC3-204ENST00000469207 F8W031 263 aaPredicted RBP15.65■□□□□ 0.1
HDAC3-204ENST00000469207 ZBED3Q96IU2 234 aaPredicted RBP15.65■□□□□ 0.1
HDAC3-204ENST00000469207 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
HDAC3-204ENST00000469207 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
HDAC3-204ENST00000469207 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
HDAC3-204ENST00000469207 PAPPA2Q9BXP8 1791 aa15.64■□□□□ 0.1
HDAC3-204ENST00000469207 PLIN1O60240 522 aa15.64■□□□□ 0.09
HDAC3-204ENST00000469207 BEND3Q5T5X7 828 aa15.64■□□□□ 0.09
HDAC3-204ENST00000469207 AOX1Q06278 1338 aa15.64■□□□□ 0.09
HDAC3-204ENST00000469207 MYO3BQ8WXR4 1341 aa15.64■□□□□ 0.09
HDAC3-204ENST00000469207 TM4SF4P48230 202 aa15.63■□□□□ 0.09
HDAC3-204ENST00000469207 IFIT5Q13325 482 aaKnown RBP15.63■□□□□ 0.09
HDAC3-204ENST00000469207 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
HDAC3-204ENST00000469207 CTU1Q7Z7A3 348 aaKnown RBP15.63■□□□□ 0.09
HDAC3-204ENST00000469207 ZNF296Q8WUU4 475 aaPredicted RBP15.63■□□□□ 0.09
HDAC3-204ENST00000469207 HDAC9Q9UKV0 1011 aa15.63■□□□□ 0.09
HDAC3-204ENST00000469207 ANGEL1Q9UNK9 670 aaKnown RBP15.63■□□□□ 0.09
HDAC3-204ENST00000469207 NF2P35240 595 aa15.62■□□□□ 0.09
HDAC3-204ENST00000469207 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
HDAC3-204ENST00000469207 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
HDAC3-204ENST00000469207 TNRC18O15417 2968 aaPredicted RBP15.62■□□□□ 0.09
HDAC3-204ENST00000469207 CLRN2A0PK11 232 aa15.61■□□□□ 0.09
HDAC3-204ENST00000469207 DLGAP5Q15398 846 aa15.61■□□□□ 0.09
HDAC3-204ENST00000469207 LDLRAD1Q5T700 205 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms