RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 COL4A5P29400 1685 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 LTBP1Q14766 1721 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 YDJCA8MPS7 323 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 ECE2O60344 883 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 PUM3Q15397 648 aaKnown RBP14.81□□□□□ -0.04
VPS13D-204ENST00000469054 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 IRS2Q9Y4H2 1338 aa14.81□□□□□ -0.04
VPS13D-204ENST00000469054 CHD4Q14839 1912 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
VPS13D-204ENST00000469054 FGFR2P21802 821 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 CXCL9Q07325 125 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 ZNF784Q8NCA9 323 aaPredicted RBP14.8□□□□□ -0.04
VPS13D-204ENST00000469054 LPIN2Q92539 896 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 ZNF541Q9H0D2 1346 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 SBF1O95248 1867 aa14.8□□□□□ -0.04
VPS13D-204ENST00000469054 RAD17O75943 681 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 MYCNP04198 464 aaPredicted RBP14.79□□□□□ -0.04
VPS13D-204ENST00000469054 IFIT1P09914 478 aaKnown RBP14.79□□□□□ -0.04
VPS13D-204ENST00000469054 SLC5A1P13866 664 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 TFCP2Q12800 502 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 OS9Q13438 667 aaPredicted RBP14.79□□□□□ -0.04
VPS13D-204ENST00000469054 AAMPQ13685 434 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 CIAPIN1Q6FI81 312 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 KDM2BQ8NHM5 1336 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
VPS13D-204ENST00000469054 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
VPS13D-204ENST00000469054 SASH1O94885 1247 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
VPS13D-204ENST00000469054 TNIP1Q15025 636 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 ATP2B3Q16720 1220 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 HSP90AB4PQ58FF6 505 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 ZNF804AQ7Z570 1209 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 GPC2Q8N158 579 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 FAM84BQ96KN1 310 aaPredicted RBP14.78□□□□□ -0.04
VPS13D-204ENST00000469054 GPBP1L1Q9HC44 474 aaPredicted RBP14.78□□□□□ -0.04
VPS13D-204ENST00000469054 CD209Q9NNX6 404 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 AKAP2Q9Y2D5 859 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 GJA3Q9Y6H8 435 aa14.78□□□□□ -0.04
VPS13D-204ENST00000469054 HIBADHP31937 336 aaKnown RBP14.77□□□□□ -0.05
VPS13D-204ENST00000469054 GYG1P46976 350 aa14.77□□□□□ -0.05
VPS13D-204ENST00000469054 CAVIN4Q5BKX8 364 aa14.77□□□□□ -0.05
VPS13D-204ENST00000469054 FBXO33Q7Z6M2 555 aa14.77□□□□□ -0.05
VPS13D-204ENST00000469054 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.05
VPS13D-204ENST00000469054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.77□□□□□ -0.05
VPS13D-204ENST00000469054 SPEF2Q9C093 1822 aa14.77□□□□□ -0.05
VPS13D-204ENST00000469054 PSMD14O00487 310 aa14.76□□□□□ -0.05
VPS13D-204ENST00000469054 IL1R1P14778 569 aa14.76□□□□□ -0.05
VPS13D-204ENST00000469054 TIMM10P62072 90 aa14.76□□□□□ -0.05
VPS13D-204ENST00000469054 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
VPS13D-204ENST00000469054 VPS37DQ86XT2 251 aa14.76□□□□□ -0.05
VPS13D-204ENST00000469054 ERC1Q8IUD2 1116 aa14.76□□□□□ -0.05
VPS13D-204ENST00000469054 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
VPS13D-204ENST00000469054 A0A1B0GUL7 405 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 USP17L3A6NCW0 530 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 USP17L4A6NCW7 530 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
VPS13D-204ENST00000469054 VIL1P09327 827 aaKnown RBP14.75□□□□□ -0.05
VPS13D-204ENST00000469054 BCAMP50895 628 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 USP17L1Q7RTZ2 530 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 TDRD7Q8NHU6 1098 aaKnown RBP14.75□□□□□ -0.05
VPS13D-204ENST00000469054 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
VPS13D-204ENST00000469054 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 RAB11FIP3O75154 756 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
VPS13D-204ENST00000469054 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 TTLL5Q6EMB2 1281 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 NEUROD6Q96NK8 337 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 DCTPP1Q9H773 170 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 NMRK2Q9NPI5 230 aa14.74□□□□□ -0.05
VPS13D-204ENST00000469054 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
VPS13D-204ENST00000469054 DICER1Q9UPY3 1922 aaKnown RBP14.74□□□□□ -0.05
VPS13D-204ENST00000469054 POTECB2RU33 542 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 ADORA1P30542 326 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 GMPSP49915 693 aaPredicted RBP14.73□□□□□ -0.05
VPS13D-204ENST00000469054 SCNN1DP51172 638 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 GTF2IP78347 998 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 RSBN1LQ6PCB5 846 aaPredicted RBP14.73□□□□□ -0.05
VPS13D-204ENST00000469054 RHPN1Q8TCX5 695 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 XAGE2Q96GT9 111 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
VPS13D-204ENST00000469054 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
VPS13D-204ENST00000469054 IQCA1LA6NCM1 817 aa14.72□□□□□ -0.05
VPS13D-204ENST00000469054 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
VPS13D-204ENST00000469054 DACT2Q5SW24 774 aa14.72□□□□□ -0.05
VPS13D-204ENST00000469054 DPF2Q92785 391 aa14.72□□□□□ -0.05
VPS13D-204ENST00000469054 FBXW7Q969H0 707 aa14.72□□□□□ -0.05
VPS13D-204ENST00000469054 APBB1O00213 710 aa14.71□□□□□ -0.05
VPS13D-204ENST00000469054 KIF3CO14782 793 aa14.71□□□□□ -0.05
VPS13D-204ENST00000469054 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-204ENST00000469054 LMOD1P29536 600 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-204ENST00000469054 PHKA1P46020 1223 aa14.71□□□□□ -0.05
VPS13D-204ENST00000469054 HDAC1Q13547 482 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-204ENST00000469054 CCDC102BQ68D86 513 aa14.71□□□□□ -0.05
VPS13D-204ENST00000469054 AGBL3Q8NEM8 1001 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms