RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 C21orf2O43822 256 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 LMNB1P20700 586 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 ATP2B3Q16720 1220 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 CCDC93Q567U6 631 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 DPP8Q6V1X1 898 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-216ENST00000468949 AACSQ86V21 672 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 CHD1LQ86WJ1 897 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 VPS37DQ86XT2 251 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 NEUROD6Q96NK8 337 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 MINPP1Q9UNW1 487 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 NSFL1CQ9UNZ2 370 aaKnown RBP9.97□□□□□ -0.81
HDAC6-216ENST00000468949 KDM2BQ8NHM5 1336 aa9.97□□□□□ -0.81
HDAC6-216ENST00000468949 CCDC88AQ3V6T2 1871 aa9.96□□□□□ -0.81
HDAC6-216ENST00000468949 G3V3G9 751 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 UFL1O94874 794 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 PDE8BO95263 885 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 ATP2B4P23634 1241 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 NUCB1Q02818 461 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 TNNI3KQ59H18 835 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 MPNDQ8N594 471 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 SUPT20HQ8NEM7 779 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-216ENST00000468949 EYA3Q99504 573 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 ZNF609O15014 1411 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 SNED1Q8TER0 1413 aa9.96□□□□□ -0.82
HDAC6-216ENST00000468949 SMARCA5O60264 1052 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-216ENST00000468949 TAF5LO75529 589 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 LPIN2Q92539 896 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 GPR108Q9NPR9 543 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 LEMD3Q9Y2U8 911 aa9.95□□□□□ -0.82
HDAC6-216ENST00000468949 WDR90Q96KV7 1748 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 ZNF804BA4D1E1 1349 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 A0A1B0GUL7 405 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-216ENST00000468949 SASH1O94885 1247 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 GPSM2P81274 684 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 CCDC158Q5M9N0 1113 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 TTC39AQ5SRH9 613 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
HDAC6-216ENST00000468949 GNL3LQ9NVN8 582 aaKnown RBP9.94□□□□□ -0.82
HDAC6-216ENST00000468949 ERC2O15083 957 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 MX1P20591 662 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 RGS3P49796 1198 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 C1QTNF8P60827 252 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC6-216ENST00000468949 VGLL2Q8N8G2 317 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 CCDC8Q9H0W5 538 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-216ENST00000468949 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 COL4A1P02462 1669 aa9.93□□□□□ -0.82
HDAC6-216ENST00000468949 TAF1P21675 1872 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 PRELPP51888 382 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 TBC1D16Q8TBP0 767 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 XAGE2Q96GT9 111 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 ZC3H12CQ9C0D7 883 aaKnown RBP9.92□□□□□ -0.82
HDAC6-216ENST00000468949 DUOX1Q9NRD9 1551 aa9.92□□□□□ -0.82
HDAC6-216ENST00000468949 MED23Q9ULK4 1368 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 KIF3CO14782 793 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 PPIP5K2O43314 1243 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 UQCRFS1P1P0C7P4 283 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 TIMM10P62072 90 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 WASHC4Q2M389 1173 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 OLFM4Q6UX06 510 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-216ENST00000468949 PSMD1Q99460 953 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 DBNDD2Q9BQY9 259 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 ECHDC1Q9NTX5 307 aa9.91□□□□□ -0.82
HDAC6-216ENST00000468949 TLR7Q9NYK1 1049 aaKnown RBP9.91□□□□□ -0.82
HDAC6-216ENST00000468949 LTBP1Q14766 1721 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 AOX1Q06278 1338 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 RIMBP2O15034 1052 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 GLRX3O76003 335 aaKnown RBP9.9□□□□□ -0.82
HDAC6-216ENST00000468949 FGFR2P21802 821 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 ADORA1P30542 326 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 HIBADHP31937 336 aaKnown RBP9.9□□□□□ -0.82
HDAC6-216ENST00000468949 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 POLLQ9UGP5 575 aa9.9□□□□□ -0.82
HDAC6-216ENST00000468949 DBNLQ9UJU6 430 aaKnown RBP9.9□□□□□ -0.82
HDAC6-216ENST00000468949 COL4A5P29400 1685 aa9.9□□□□□ -0.83
HDAC6-216ENST00000468949 A0A1B0GUL6 1792 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 GLTPD2A6NH11 291 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 SNAP23O00161 211 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms