RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
TRAPPC10-207ENST00000468864 ERLIN2O94905 339 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 IKQ13123 557 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 ZBTB43O43298 467 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 IDEP14735 1019 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 IFIT5Q13325 482 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 LONRF3Q496Y0 759 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 TTC31Q49AM3 519 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 AKR1B10O60218 316 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 TFCP2Q12800 502 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
TRAPPC10-207ENST00000468864 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 NEFHP12036 1026 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 LRRC8AQ8IWT6 810 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 USO1O60763 962 aaKnown RBP12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 ATF3P18847 181 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 NLRP5P59047 1200 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 ZSCAN26Q16670 478 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 LRRC59Q96AG4 307 aaKnown RBP12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 MCM3P25205 808 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 USP28Q96RU2 1077 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 KIF2CQ99661 725 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
TRAPPC10-207ENST00000468864 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 EBAG9O00559 213 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 IFFO1Q0D2I5 559 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 SMC1AQ14683 1233 aaKnown RBP12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 DESI2Q9BSY9 194 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 ZNF202O95125 648 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 MTX1Q13505 466 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 CCDC43Q96MW1 224 aaKnown RBP12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 LARGE1O95461 756 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 USP5P45974 858 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 TRMT44Q8IYL2 757 aaKnown RBP12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
TRAPPC10-207ENST00000468864 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 CUL4AQ13619 759 aa12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 CCDC96Q2M329 555 aa12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 PROSER2Q86WR7 435 aaPredicted RBP12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 FTOQ9C0B1 505 aaKnown RBP eCLIP12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 GOPCQ9HD26 462 aa12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 PAG1Q9NWQ8 432 aa12.08□□□□□ -0.47
TRAPPC10-207ENST00000468864 IFT172Q9UG01 1749 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 UBA7P41226 1012 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 HINFPQ9BQA5 517 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 TMX4Q9H1E5 349 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 KDM5CP41229 1560 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 TMCO5BA8MYB1 307 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 GOLGA8FQ08AF8 430 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 GOLGA8DPQ0D2H9 430 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
TRAPPC10-207ENST00000468864 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 SEC31AO94979 1220 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 HDXQ7Z353 690 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 SEC62Q99442 399 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 NOP2P46087 812 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-207ENST00000468864 NFE2L3Q9Y4A8 694 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms