RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 PASKQ96RG2 1323 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
CLRN1-204ENST00000468836 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
CLRN1-204ENST00000468836 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 METTL24Q5JXM2 366 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 SAMD7Q7Z3H4 446 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 ZC3H15Q8WU90 426 aaKnown RBP16.27■□□□□ 0.2
CLRN1-204ENST00000468836 KAZALD1Q96I82 304 aa16.27■□□□□ 0.2
CLRN1-204ENST00000468836 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 BCAR3O75815 825 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 KLRK1P26718 216 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
CLRN1-204ENST00000468836 ADAMTSL1Q8N6G6 1762 aa16.26■□□□□ 0.19
CLRN1-204ENST00000468836 GNAI3P08754 354 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 ZKSCAN2Q63HK3 967 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
CLRN1-204ENST00000468836 DCPSQ96C86 337 aaKnown RBP16.25■□□□□ 0.19
CLRN1-204ENST00000468836 MKRN1Q9UHC7 482 aaKnown RBP16.25■□□□□ 0.19
CLRN1-204ENST00000468836 SNAP23O00161 211 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 TRIM27P14373 513 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 GTF2IP78347 998 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
CLRN1-204ENST00000468836 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
CLRN1-204ENST00000468836 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
CLRN1-204ENST00000468836 ZNF408Q9H9D4 720 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 HDAC9Q9UKV0 1011 aa16.24■□□□□ 0.19
CLRN1-204ENST00000468836 TRAF5O00463 557 aa16.23■□□□□ 0.19
CLRN1-204ENST00000468836 HIRAP54198 1017 aaPredicted RBP16.23■□□□□ 0.19
CLRN1-204ENST00000468836 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
CLRN1-204ENST00000468836 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
CLRN1-204ENST00000468836 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
CLRN1-204ENST00000468836 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
CLRN1-204ENST00000468836 ZNF609O15014 1411 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
CLRN1-204ENST00000468836 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 KLHDC4Q8TBB5 520 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 MEIS3Q99687 375 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 MYOZ2Q9NPC6 264 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 GGA3Q9NZ52 723 aa16.22■□□□□ 0.19
CLRN1-204ENST00000468836 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
CLRN1-204ENST00000468836 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
CLRN1-204ENST00000468836 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
CLRN1-204ENST00000468836 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
CLRN1-204ENST00000468836 CAVIN4Q5BKX8 364 aa16.21■□□□□ 0.19
CLRN1-204ENST00000468836 MXD3Q9BW11 206 aa16.21■□□□□ 0.19
CLRN1-204ENST00000468836 PGAP2Q9UHJ9 254 aa16.21■□□□□ 0.19
CLRN1-204ENST00000468836 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
CLRN1-204ENST00000468836 EYA2O00167 538 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 EGFRP00533 1210 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
CLRN1-204ENST00000468836 MMP14P50281 582 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 KIAA0825Q8IV33 1275 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 SIL1Q9H173 461 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 CNTNAP1P78357 1384 aa16.2■□□□□ 0.18
CLRN1-204ENST00000468836 PDE8BO95263 885 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 IL1R1P14778 569 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 GYG1P46976 350 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLRN1-204ENST00000468836 SCARF1Q14162 830 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
CLRN1-204ENST00000468836 DEFB115Q30KQ5 88 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
CLRN1-204ENST00000468836 GMLQ99445 158 aa16.19■□□□□ 0.18
CLRN1-204ENST00000468836 GNAI2P04899 355 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 SLC5A1P13866 664 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 GRM1Q13255 1194 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 IRS2Q9Y4H2 1338 aa16.18■□□□□ 0.18
CLRN1-204ENST00000468836 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 ADM5C9JUS6 153 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
CLRN1-204ENST00000468836 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 PTPN12Q05209 780 aaKnown RBP16.17■□□□□ 0.18
CLRN1-204ENST00000468836 ITPRIPQ8IWB1 547 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
CLRN1-204ENST00000468836 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 CEP126Q9P2H0 1117 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
CLRN1-204ENST00000468836 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
CLRN1-204ENST00000468836 CIAO1O76071 339 aa16.16■□□□□ 0.18
CLRN1-204ENST00000468836 SASH1O94885 1247 aa16.16■□□□□ 0.18
CLRN1-204ENST00000468836 IL15P40933 162 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms