RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 BEND3Q5T5X7 828 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 SOGA3Q5TF21 947 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 ZNF787Q6DD87 383 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 STYK1Q6J9G0 422 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 ATF7IPQ6VMQ6 1270 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 G2E3Q7L622 706 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 PLA2G12BQ9BX93 195 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 CWC25Q9NXE8 425 aaPredicted RBP4.46□□□□□ -1.7
TRIM59-202ENST00000468542 TRMT112Q9UI30 125 aaKnown RBP4.46□□□□□ -1.7
TRIM59-202ENST00000468542 HPS5Q9UPZ3 1129 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 ABCC4O15439 1325 aa4.46□□□□□ -1.7
TRIM59-202ENST00000468542 TAF1P21675 1872 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 RTL9Q8NET4 1388 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 H0YIN7 160 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 H7C1W4 665 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 NPHP1O15259 732 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 GRIN3BO60391 1043 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 IGKV5-2P06315 115 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 NPR1P16066 1061 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 KCNA3P22001 575 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 GPTP24298 496 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 GTF2E1P29083 439 aaPredicted RBP4.45□□□□□ -1.7
TRIM59-202ENST00000468542 PRSS12P56730 875 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 GCKRQ14397 625 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 ZKSCAN2Q63HK3 967 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 INTS3Q68E01 1043 aaKnown RBP4.45□□□□□ -1.7
TRIM59-202ENST00000468542 CC2D2BQ6DHV5 1058 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 BICDL1Q6ZP65 573 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 TMC4Q7Z404 712 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 CNKSR1Q969H4 720 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 MASTLQ96GX5 879 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 NLRP3Q96P20 1036 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 MYD88Q99836 296 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 SRCIN1Q9C0H9 1055 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 PIM2Q9P1W9 311 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 RCAN3Q9UKA8 241 aa4.45□□□□□ -1.7
TRIM59-202ENST00000468542 ABCC12Q96J65 1359 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 ATP5J2-PTCD1G3V325 749 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 SMAPO00193 183 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 GRM8O00222 908 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 IRS4O14654 1257 aaPredicted RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 PDE8AO60658 829 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 BBOX1O75936 387 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 TRIM27P14373 513 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 ALDH1B1P30837 517 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 CASP7P55210 303 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 PDE3AQ14432 1141 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 RABL6Q3YEC7 729 aaPredicted RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 ERFEQ4G0M1 354 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 DALRD3Q5D0E6 543 aaKnown RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 TTLL6Q8N841 843 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 TTC13Q8NBP0 860 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 BCL2L13Q9BXK5 485 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 CHMP4BQ9H444 224 aaKnown RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 NOB1Q9ULX3 412 aaKnown RBP4.44□□□□□ -1.7
TRIM59-202ENST00000468542 LTBP3Q9NS15 1303 aa4.44□□□□□ -1.7
TRIM59-202ENST00000468542 TIAM2Q8IVF5 1701 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 COL4A1P02462 1669 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 F6X3S4 739 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 TCERG1O14776 1098 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 BCAR3O75815 825 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 CSF1RP07333 972 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 GNAI3P08754 354 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 DPEP1P16444 411 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 OSBPP22059 807 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 CTSWP56202 376 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 PPP4CP60510 307 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 MTX1Q13505 466 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 AAMPQ13685 434 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 E2F4Q16254 413 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 CWF19L2Q2TBE0 894 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 CCDC152Q4G0S7 254 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 UBE3BQ7Z3V4 1068 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 NUTM1Q86Y26 1132 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 C2CD5Q86YS7 1000 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 NLGN2Q8NFZ4 835 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 C7orf43Q8WVR3 580 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 RPGRQ92834 1020 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 TATDN2Q93075 761 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 FAM89AQ96GI7 184 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 RBM17Q96I25 401 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 CDC5LQ99459 802 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 USP44Q9H0E7 712 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 VPS33BQ9H267 617 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 NPDC1Q9NQX5 325 aaPredicted RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 C9orf78Q9NZ63 289 aaPredicted RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 V9GY48 417 aaPredicted RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 DUOX1Q9NRD9 1551 aa4.43□□□□□ -1.7
TRIM59-202ENST00000468542 ZC3H4Q9UPT8 1303 aaKnown RBP4.43□□□□□ -1.7
TRIM59-202ENST00000468542 SPEF2Q9C093 1822 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 A0A0G2JLW4 131 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 MAP3K7O43318 606 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 NBPF7P0C2Y1 421 aaPredicted RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 UBTFL1P0CB47 393 aaPredicted RBP4.42□□□□□ -1.7
TRIM59-202ENST00000468542 CHRNA5P30532 468 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 GRAPQ13588 217 aa4.42□□□□□ -1.7
TRIM59-202ENST00000468542 NBR1Q14596 966 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms