RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 AGBL3Q8NEM8 1001 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
COMMD3-206ENST00000468179 RSBN1LQ6PCB5 846 aaPredicted RBP18.36■□□□□ 0.53
COMMD3-206ENST00000468179 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
COMMD3-206ENST00000468179 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
COMMD3-206ENST00000468179 USP44Q9H0E7 712 aa18.35■□□□□ 0.53
COMMD3-206ENST00000468179 PGAP2Q9UHJ9 254 aa18.35■□□□□ 0.53
COMMD3-206ENST00000468179 MMP14P50281 582 aa18.34■□□□□ 0.53
COMMD3-206ENST00000468179 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
COMMD3-206ENST00000468179 BICC1Q9H694 974 aaKnown RBP18.34■□□□□ 0.53
COMMD3-206ENST00000468179 ADAMTSL1Q8N6G6 1762 aa18.34■□□□□ 0.53
COMMD3-206ENST00000468179 MYO3BQ8WXR4 1341 aa18.33■□□□□ 0.53
COMMD3-206ENST00000468179 STRIP1Q5VSL9 837 aa18.33■□□□□ 0.53
COMMD3-206ENST00000468179 C15orf52Q6ZUT6 534 aaKnown RBP18.33■□□□□ 0.53
COMMD3-206ENST00000468179 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.53
COMMD3-206ENST00000468179 JMYQ8N9B5 988 aa18.33■□□□□ 0.53
COMMD3-206ENST00000468179 KAZALD1Q96I82 304 aa18.33■□□□□ 0.53
COMMD3-206ENST00000468179 ZNF594Q96JF6 807 aaPredicted RBP18.33■□□□□ 0.53
COMMD3-206ENST00000468179 ZNF609O15014 1411 aa18.32■□□□□ 0.52
COMMD3-206ENST00000468179 TAF5LO75529 589 aa18.32■□□□□ 0.52
COMMD3-206ENST00000468179 UBTFL1P0CB47 393 aaPredicted RBP18.32■□□□□ 0.52
COMMD3-206ENST00000468179 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
COMMD3-206ENST00000468179 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
COMMD3-206ENST00000468179 WTIPA6NIX2 430 aaPredicted RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 PLIN1O60240 522 aa18.31■□□□□ 0.52
COMMD3-206ENST00000468179 USP17L8P0C7I0 530 aa18.31■□□□□ 0.52
COMMD3-206ENST00000468179 HIRAP54198 1017 aaPredicted RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
COMMD3-206ENST00000468179 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
COMMD3-206ENST00000468179 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
COMMD3-206ENST00000468179 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
COMMD3-206ENST00000468179 ZNF280AP59817 542 aaPredicted RBP18.3■□□□□ 0.52
COMMD3-206ENST00000468179 UBE4AQ14139 1066 aa18.3■□□□□ 0.52
COMMD3-206ENST00000468179 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
COMMD3-206ENST00000468179 TTLL5Q6EMB2 1281 aa18.3■□□□□ 0.52
COMMD3-206ENST00000468179 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
COMMD3-206ENST00000468179 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
COMMD3-206ENST00000468179 ANKRD44Q8N8A2 993 aa18.29■□□□□ 0.52
COMMD3-206ENST00000468179 GMLQ99445 158 aa18.29■□□□□ 0.52
COMMD3-206ENST00000468179 CD209Q9NNX6 404 aa18.29■□□□□ 0.52
COMMD3-206ENST00000468179 ABT1Q9ULW3 272 aaKnown RBP18.29■□□□□ 0.52
COMMD3-206ENST00000468179 ZBED9Q6R2W3 1325 aa18.29■□□□□ 0.52
COMMD3-206ENST00000468179 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
COMMD3-206ENST00000468179 DACT2Q5SW24 774 aa18.28■□□□□ 0.52
COMMD3-206ENST00000468179 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
COMMD3-206ENST00000468179 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
COMMD3-206ENST00000468179 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
COMMD3-206ENST00000468179 CNTNAP1P78357 1384 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 GNAI3P08754 354 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 KLRK1P26718 216 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 DEFB115Q30KQ5 88 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
COMMD3-206ENST00000468179 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
COMMD3-206ENST00000468179 GLIS2Q9BZE0 524 aaPredicted RBP18.27■□□□□ 0.52
COMMD3-206ENST00000468179 MYOZ2Q9NPC6 264 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.52
COMMD3-206ENST00000468179 TRAF5O00463 557 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 IL1R1P14778 569 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 GTF2IP78347 998 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 METTL24Q5JXM2 366 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 KRT26Q7Z3Y9 468 aa18.26■□□□□ 0.51
COMMD3-206ENST00000468179 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
COMMD3-206ENST00000468179 RASSF10A6NK89 507 aa18.25■□□□□ 0.51
COMMD3-206ENST00000468179 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
COMMD3-206ENST00000468179 POTEHQ6S545 545 aa18.25■□□□□ 0.51
COMMD3-206ENST00000468179 USP48Q86UV5 1035 aa18.25■□□□□ 0.51
COMMD3-206ENST00000468179 SULF1Q8IWU6 871 aa18.25■□□□□ 0.51
COMMD3-206ENST00000468179 FBXO3Q9UK99 471 aa18.25■□□□□ 0.51
COMMD3-206ENST00000468179 SNAP23O00161 211 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 BCAR3O75815 825 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 FKBP1AP62942 108 aaKnown RBP18.24■□□□□ 0.51
COMMD3-206ENST00000468179 SCARF1Q14162 830 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 CAVIN4Q5BKX8 364 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
COMMD3-206ENST00000468179 PDE8BO95263 885 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 EGFRP00533 1210 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
COMMD3-206ENST00000468179 ECE1P42892 770 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 CST9Q5W186 159 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 SCN9AQ15858 1988 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 EYA2O00167 538 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 SASH1O94885 1247 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 TRIM27P14373 513 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 GGA3Q9NZ52 723 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 TLL2Q9Y6L7 1015 aa18.23■□□□□ 0.51
COMMD3-206ENST00000468179 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
COMMD3-206ENST00000468179 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
COMMD3-206ENST00000468179 VEGFBP49765 207 aa18.22■□□□□ 0.51
COMMD3-206ENST00000468179 FMR1Q06787 632 aaKnown RBP eCLIP18.22■□□□□ 0.51
COMMD3-206ENST00000468179 KIAA0825Q8IV33 1275 aa18.22■□□□□ 0.51
COMMD3-206ENST00000468179 HHIPL1Q96JK4 782 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms