RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 CREB3L3Q68CJ9 461 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 RGS17Q9UGC6 210 aaPredicted RBP12.28□□□□□ -0.44
CDCA7-206ENST00000467411 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
CDCA7-206ENST00000467411 GYS1P13807 737 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 CCDC102BQ68D86 513 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 ZMYM6O95789 1325 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 GOLIM4O00461 696 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 IGSF3O75054 1194 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 SLC5A1P13866 664 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
CDCA7-206ENST00000467411 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
CDCA7-206ENST00000467411 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
CDCA7-206ENST00000467411 TCRBV5S4A2TA0A5A2 114 aa12.27□□□□□ -0.44
CDCA7-206ENST00000467411 CHRNDQ07001 517 aa12.27□□□□□ -0.44
CDCA7-206ENST00000467411 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.44
CDCA7-206ENST00000467411 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.44
CDCA7-206ENST00000467411 MAST3O60307 1309 aa12.27□□□□□ -0.45
CDCA7-206ENST00000467411 FOXP2O15409 715 aa12.27□□□□□ -0.45
CDCA7-206ENST00000467411 RFC4P35249 363 aa12.27□□□□□ -0.45
CDCA7-206ENST00000467411 NFIXQ14938 502 aa12.27□□□□□ -0.45
CDCA7-206ENST00000467411 FBXL16Q8N461 479 aa12.27□□□□□ -0.45
CDCA7-206ENST00000467411 COL11A2P13942 1736 aaPredicted RBP12.26□□□□□ -0.45
CDCA7-206ENST00000467411 ZAP70P43403 619 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 MPHOSPH8Q99549 860 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 COL1A1P02452 1464 aaPredicted RBP12.26□□□□□ -0.45
CDCA7-206ENST00000467411 TRIM37O94972 964 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 TMED8Q6PL24 325 aaPredicted RBP12.26□□□□□ -0.45
CDCA7-206ENST00000467411 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
CDCA7-206ENST00000467411 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 CHD4Q14839 1912 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 ADD2P35612 726 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 NEK4P51957 841 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
CDCA7-206ENST00000467411 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
CDCA7-206ENST00000467411 ZSCAN25Q6NSZ9 544 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 NBPF5PQ86XG9 351 aaPredicted RBP12.25□□□□□ -0.45
CDCA7-206ENST00000467411 APPBP2Q92624 585 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 RXRBP28702 533 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 PHKA1P46020 1223 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 EP400Q96L91 3159 aa12.25□□□□□ -0.45
CDCA7-206ENST00000467411 ZNF646O15015 1829 aaPredicted RBP12.25□□□□□ -0.45
CDCA7-206ENST00000467411 M0R2C6 588 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 KRT32Q14532 448 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 ADCK5Q3MIX3 580 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 RNF20Q5VTR2 975 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 OSBP2Q969R2 916 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 SEMA3EO15041 775 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 CHGBP05060 677 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 LAMB1P07942 1786 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 HSPD1P10809 573 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 PSMA5P28066 241 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 HOXA10P31260 410 aaPredicted RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 SPATA5Q8NB90 893 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 AGXT2Q9BYV1 514 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
CDCA7-206ENST00000467411 PIH1D3Q9NQM4 214 aaKnown RBP12.24□□□□□ -0.45
CDCA7-206ENST00000467411 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
CDCA7-206ENST00000467411 RPS8P62241 208 aaKnown RBP12.23□□□□□ -0.45
CDCA7-206ENST00000467411 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
CDCA7-206ENST00000467411 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
CDCA7-206ENST00000467411 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
CDCA7-206ENST00000467411 RPS6KB1P23443 525 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 GRAPQ13588 217 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
CDCA7-206ENST00000467411 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDCA7-206ENST00000467411 CYP21A2P08686 494 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 AK2P54819 239 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 ALX1Q15699 326 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 GORABQ5T7V8 394 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
CDCA7-206ENST00000467411 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
CDCA7-206ENST00000467411 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
CDCA7-206ENST00000467411 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
CDCA7-206ENST00000467411 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDCA7-206ENST00000467411 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
CDCA7-206ENST00000467411 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms