RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 DCAF16Q9NXF7 216 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 ATXN2LQ8WWM7 1075 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 GIMAP1Q8WWP7 306 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 GTF2A1LQ9UNN4 478 aa9.05□□□□□ -0.96
SPTBN1-204ENST00000467371 IQGAP2Q13576 1575 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 TPPPO94811 219 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 NAP1L1P55209 391 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 BECN1Q14457 450 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 DDB1Q16531 1140 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 OTUD6AQ7L8S5 288 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 AGAP3Q96P47 875 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 XPO7Q9UIA9 1087 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 KLRG2A4D1S0 409 aaPredicted RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 OAS2P29728 719 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 ZNF394Q53GI3 561 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 RASSF3Q86WH2 238 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 MPP4Q96JB8 637 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 DUSP9Q99956 384 aaKnown RBP9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 SELENOOQ9BVL4 669 aa9.04□□□□□ -0.96
SPTBN1-204ENST00000467371 PIP5K1CO60331 668 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 LMBRD2Q68DH5 695 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 PPP4R3AQ6IN85 833 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 ZFPM2Q8WW38 1151 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 C9orf78Q9NZ63 289 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 SUPT6HQ7KZ85 1726 aaKnown RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 SKILP12757 684 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 GPHNQ9NQX3 736 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 FAM196BA6NMK8 535 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 MAP3K7O43318 606 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 NBPF7P0C2Y1 421 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 RASA3Q14644 834 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 WAPLQ7Z5K2 1190 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 TAF4BQ92750 862 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 GINM1Q9NU53 330 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 HECW1Q76N89 1606 aa9.03□□□□□ -0.96
SPTBN1-204ENST00000467371 A6NCN8 305 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 KIAA2012Q0VF49 1180 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 SAMD14Q8IZD0 417 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 DHX36Q9H2U1 1008 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 ABCC5O15440 1437 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 AP1G2O75843 785 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 GLULP15104 373 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 EPB42P16452 691 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 ATF3P18847 181 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 NLRP6P59044 892 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 DAB2P98082 770 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■■□ 22.7
SPTBN1-204ENST00000467371 PLBD1Q6P4A8 553 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 LVRNQ6Q4G3 990 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 CPXCR1Q8N123 301 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 VMP1Q96GC9 406 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 DAPK1P53355 1430 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 ATF4P18848 351 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 CCDC173Q0VFZ6 552 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 HS1BP3Q53T59 392 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 KSR2Q6VAB6 950 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 IFNL2Q8IZJ0 200 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 CERKQ8TCT0 537 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 IPPQ9Y573 584 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
SPTBN1-204ENST00000467371 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L21D6R901 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 BBOX1O75936 387 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 MICALL1Q8N3F8 863 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 CRBNQ96SW2 442 aa9.01□□□□□ -0.97
SPTBN1-204ENST00000467371 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.01□□□□□ -0.975e-14■□□□□ 11
SPTBN1-204ENST00000467371 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms