RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 NUP98P52948 1817 aa17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 CAMK4Q16566 473 aa17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 PYCARDQ9ULZ3 195 aa17.39■□□□□ 0.37
PRPF38B-204ENST00000467302 STK3Q13188 491 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 VPS72Q15906 364 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 TFIP11Q9UBB9 837 aaKnown RBP17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 ZNF831Q5JPB2 1677 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 BCL9LQ86UU0 1499 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 EYA2O00167 538 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 DBNDD2Q9BQY9 259 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 CLSTN2Q9H4D0 955 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
PRPF38B-204ENST00000467302 ZNF609O15014 1411 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 A0A0G2JS52 829 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 JAK2O60674 1132 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 CIAO1O76071 339 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 HLFQ16534 295 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 LUZP1Q86V48 1076 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 RESTQ13127 1097 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 PGBD1Q96JS3 809 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 C8orf37Q96NL8 207 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 CBX8Q9HC52 389 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 MYH3P11055 1940 aa17.37■□□□□ 0.37
PRPF38B-204ENST00000467302 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
PRPF38B-204ENST00000467302 NLRP10Q86W26 655 aa17.36■□□□□ 0.37
PRPF38B-204ENST00000467302 HAUS7Q99871 368 aa17.36■□□□□ 0.37
PRPF38B-204ENST00000467302 FBXO3Q9UK99 471 aa17.36■□□□□ 0.37
PRPF38B-204ENST00000467302 NR1I2O75469 434 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 ANO6Q4KMQ2 910 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 NGLY1Q96IV0 654 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 SPATA31A6Q5VVP1 1343 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 CHGBP05060 677 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 CYP21A2P08686 494 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 GPTP24298 496 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 SIK1P57059 783 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 Q6ZUG5 572 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 BRF1Q92994 677 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 NDUFB9Q9Y6M9 179 aa17.35■□□□□ 0.37
PRPF38B-204ENST00000467302 CSF1RP07333 972 aa17.34■□□□□ 0.37
PRPF38B-204ENST00000467302 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
PRPF38B-204ENST00000467302 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
PRPF38B-204ENST00000467302 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
PRPF38B-204ENST00000467302 EIF5P55010 431 aaKnown RBP17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 TIMM10P62072 90 aa17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 PLA2G4DQ86XP0 818 aa17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 TSC1Q92574 1164 aa17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.37
PRPF38B-204ENST00000467302 PTGS1P23219 599 aa17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 LLPHQ9BRT6 129 aaKnown RBP17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 KIF3AQ9Y496 699 aa17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.36
PRPF38B-204ENST00000467302 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
PRPF38B-204ENST00000467302 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
PRPF38B-204ENST00000467302 SCRN1Q12765 414 aa17.32■□□□□ 0.36
PRPF38B-204ENST00000467302 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
PRPF38B-204ENST00000467302 PFKFB2O60825 505 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 IFIT5Q13325 482 aaKnown RBP17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 STOX1Q6ZVD7 989 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 KBTBD3Q8NAB2 608 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 ZNF75DP51815 510 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms