RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 SIK1P57059 783 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 LRSAM1Q6UWE0 723 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 VGLL2Q8N8G2 317 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 BRF1Q92994 677 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 NUP98P52948 1817 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 HCLS1P14317 486 aaPredicted RBP13.57□□□□□ -0.24
HPS1-208ENST00000467246 MCAMP43121 646 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 SLIT2O94813 1529 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 KCNQ2O43526 872 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 E7EWF7 191 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 FOXP2O15409 715 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 JAK2O60674 1132 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
HPS1-208ENST00000467246 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
HPS1-208ENST00000467246 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
HPS1-208ENST00000467246 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
HPS1-208ENST00000467246 ANKRD36CQ5JPF3 1778 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 PDE8BO95263 885 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 FGD1P98174 961 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 PUS7LQ9H0K6 701 aaKnown RBP13.55□□□□□ -0.24
HPS1-208ENST00000467246 NRAPQ86VF7 1730 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 CHST3Q7LGC8 479 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
HPS1-208ENST00000467246 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
HPS1-208ENST00000467246 PDCP20941 246 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
HPS1-208ENST00000467246 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
HPS1-208ENST00000467246 UBE2HP62256 183 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 SCRN1Q12765 414 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 LRRFIP1Q32MZ4 808 aaKnown RBP13.54□□□□□ -0.24
HPS1-208ENST00000467246 SYAP1Q96A49 352 aaPredicted RBP13.54□□□□□ -0.24
HPS1-208ENST00000467246 SNAP23O00161 211 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 CAMTA2O94983 1202 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 PHKA1P46020 1223 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 HAND2P61296 217 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 APPBP2Q92624 585 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
HPS1-208ENST00000467246 FGAP02671 866 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 ARID3AQ99856 593 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
HPS1-208ENST00000467246 MYH3P11055 1940 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
HPS1-208ENST00000467246 ABCC12Q96J65 1359 aa13.52□□□□□ -0.24
HPS1-208ENST00000467246 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
HPS1-208ENST00000467246 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
HPS1-208ENST00000467246 ANP32BQ92688 251 aaKnown RBP13.52□□□□□ -0.24
HPS1-208ENST00000467246 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.24
HPS1-208ENST00000467246 GPAA1O43292 621 aa13.52□□□□□ -0.25
HPS1-208ENST00000467246 PFKFB2O60825 505 aa13.52□□□□□ -0.25
HPS1-208ENST00000467246 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
HPS1-208ENST00000467246 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.25
HPS1-208ENST00000467246 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
HPS1-208ENST00000467246 AGXT2Q9BYV1 514 aa13.52□□□□□ -0.25
HPS1-208ENST00000467246 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
HPS1-208ENST00000467246 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 PDIA4P13667 645 aaKnown RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 KCNQ4P56696 695 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 TRIM44Q96DX7 344 aaPredicted RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 FGFR2P21802 821 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 ADD2P35612 726 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 LPIN2Q92539 896 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 AK7Q96M32 723 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■■□□ 16.4
HPS1-208ENST00000467246 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 CTNNA3Q9UI47 895 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 NAP1L2Q9ULW6 460 aaPredicted RBP13.51□□□□□ -0.25
HPS1-208ENST00000467246 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
HPS1-208ENST00000467246 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
HPS1-208ENST00000467246 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
HPS1-208ENST00000467246 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
HPS1-208ENST00000467246 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 NTSR2O95665 410 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 KRT85P78386 507 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
HPS1-208ENST00000467246 TOM1O60784 492 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 PHF14O94880 888 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms